Publikationen des Instituts

Kobayashi, W.; Michael, A. K.; Ruangroengkulrith, S.; Kümmecke, M.; Tachibana, K.: Protocol for integrative analysis of transcription factornucleosome interactions using SeEN-seq and cryo-EM structure determination. STAR Protocols 7 (1), 104295 (2026)

Xu, T. T.; Guyot, C.; Murray, P. J.: Revisiting tryptophan metabolism in cancer: complexity, context, and spatial heterogeneity. Current Opinion in Immunology 98, 102706 (2026)

Bonnet, J.; Triantopoulou, E.; Birnhäupl, J.; Lu, C.; Fuller, M. T.; Müller, J.: Histone modification cross-talk and protein complex diversification confer plasticity to Polycomb repression. Genes & Development 40 (1-2), S. 43 - 55 (2026)

Figueiredo, A. Q.; Domingos, I. F.; Carvalho, L. B.; Wisniewski, J. R.; Korentzelos, D.; Quiroga-Garza, G.; Dhir, R.; Lodeiro, C.; Capelo, J. L.; Santos, H. M.: Novel tissue markers in renal neoplasms using molar-scale quantitative proteomics via the total protein approach normalised with protein deglycase DJ-1 (PARK7). Talanta 297 (Part A), 128558 (2026)

Garriga, F.; Codina-Benaiges, J.; Yeste, M.; Llavanera, M.: Calcium homeostasis role in preserving sperm function and metabolic activity during liquid storage of pig semen. Theriogenology 249, 117638 (2026)

Guinart, A.; Qutbuddin, Y.; Schwille, P.; Feringa, B. L.: Photoisomerizing molecules in biological membranes. Nature Reviews Chemistry 10, S. 12 - 30 (2026)

Haas, D. T.; Weindl, D.; Kakimoto, P.; Trautmann, E.-M.; Schessner, J. P.; Mao, X.; Gerl, M. J.; Gerwien, M.; Muller, T. D.; Klose, C. et al.; Cheng, X.; Hasenauer, J.; Krahmer, N.: C-COMPASS: A user-friendly neural network tool profiles cell compartments at protein and lipid levels. Nature Methods 23, S. 118 - 130 (2026)

Hennes, E.; Lucas, B.; Scholes, N. S.; Cheng, X.-F.; Scott, D. C.; Bischoff, M.; Reich, K.; Gasper, R.; Lucas, M.; Xu, T. T. et al.; Rossini, S.; Pulvermacher, L.-M.; Dotsch, L.; Imrichova, H.; Brause, A.; Fuhrer, S.; Naredla, K. R.; Sievers, S.; Kumar, K.; Janning, P.; Orabona, C.; Gersch, M.; Murray, P. J.; Schulman, B. A.; Winter, G. E.; Ziegler, S.; Waldmann, H.: Monovalent pseudo-natural products supercharge degradation of IDO1 by its native E3 KLHDC3. Nature Chemistry (2026)

Jia, H.; Sun, H.; Flommersfeld, J.; Shi, W.; Siedler, F.; Schwille, P.: Three-dimensional robotic structures fabricated and powered entirely with proteins. Nature Protocols 21, S. 293 - 318 (2026)

Retzer, T. M.; Rajappa, L.; Takahashi, M.; Hamdan, S. M.; Duderstadt, K. E.: Real-time imaging of rotation during synthesis by the replisome. Science Advances 12 (1), eadx4089 (2026)

Schmitt, F.; Ten Cate, V.; Fischer, Z.; Hagen, M.; Steigenberger, B.; Tenzer, S.; Wild, P. S.; Schmidlin, T.: Metabolic Profiling of the EmDia Cohort by LC-MS Reveals Empagliflozin-Intake Associated Regulation of 1,5-anhydroglucitol and Urate. Proteomics 26 (1), S. 44 - 56 (2026)

Young, L. N.; Sherrard, A.; Zhou, H.; Shaikh, F.; Hutchings, J.; Riggi, M.; Narasimhan, M.; Flaherty, W. A.; Bennett, E. J.; Rosen, M. K. et al.; Giraldez, A. J.; Villa, E.: ExoSloNano: Multimodal nanogold labels for identification of macromolecules in live cells and cryo-electron tomograms. Nature Methods 23, S. 131 - 142 (2026)

Schelle, L.; Kuttenlochner, W.; Sanchez, V.; Steigenberger, B.; Finkl, K.; Schmid, M.; Douat, C.; Halldorsson, E.; Schubert, M.; Suppmann, S.: Rapid virus-free production of recombinant yellow fever virus envelope protein and its in-depth biophysical analysis. Scientific Reports 15, 45666 (2025)

Albrecht, J.; Reitinger, T.; Basquin, J.; Schüssler, S.; Riggi, M.; Schäfer, I. B.; Conti, E.: Mechanisms governing poly(A)-tail-length specificity of the human PAN2-PAN3 deadenylase complex. Cell Reports 44 (12), 116609 (2025)

Heger, K.; Masjedi, A.; Yeroslaviz, A.; Zeng, T.; Baygun, S.; Vicente-Luque, A.; Lien, C.-I.; Osswald, L.; Saur, D.; Kovacs, D. et al.; Schmidt-Supprian, M.: Serous Cavity Mast Cells Depend on the ROQUIN Paralogs. European Journal of Immunology 55 (12), e70110 (2025)

Fortun, N.; Gaspar, P.; Jose, E.; Lao, A.; Mendoza, E.; Razon, L.: A Reaction Network Approach to Modeling Carbon Dioxide Removal Systems. Process Integration and Optimization for Sustainability (2025)

Lapios, P.; Anger, R.; Paget-Blanc, V.; Marza, E.; Lucic, V.; Fronzes, R.; Herzog, E.; Perrais, D.: Cryo-correlative light and electron tomography of dopaminergic axonal varicosities reveals non-synaptic modulation of cortico-striatal synapses. Nature Communications 16, 11467 (2025)

Zhang, H.; Ugur, E.; Hake, C.; Romero, H.; Arroyo, M.; Mahmoud, M.; Lermyte, F.; Leonhardt, H.; Cardoso, M. C.: Heterochromatome wide analyses reveal MBD2 as a phase separation scaffold for heterochromatin compartmentalization and composition. Nucleic Acids Research 53 (22), gkaf1380 (2025)

Zhou, H.; Huertas, J.; Maristany, M. J.; Russell, K.; Hwang, J. H.; Yao, R.-W.; Samanta, N.; Hutchings, J.; Billur, R.; Shiozaki, M. et al.; Zhao, X.; Doolittle, L. K.; Gibson, B. A.; Soranno, A.; Riggi, M.; Espinosa, J. R.; Yu, Z.; Villa, E.; Collepardo-Guevara, R.; Rosen, M. K.: Multiscale structure of chromatin condensates explains phase separation and material properties. Science 390 (6777), eadv6588 (2025)

Corvelo Benz, N.; Miranda, L.; Chen, D.; Sattler, J.; Borgwardt, K.: Conformal Prediction with Knowledge Graphs for Reliable Antimicrobial Resistance Detection with MALDI-TOF Mass Spectra. Journal of Computational Biology (2025)