Publications of F. Gnad

Journal Article (36)

21.
Journal Article
Zielinska, D. F.; Gnad, F.; Jedrusik-Bode, M.; Wisniewski, J. R.; Mann, M.: Caenorhabditis elegans Has a Phosphoproteome Atypical for Metazoans That Is Enriched in Developmental and Sex Determination Proteins. Journal of Proteome Research 8 (8), pp. 4039 - 4049 (2009)
22.
Journal Article
Oppermann, F. S.; Gnad, F.; Olsen, J. V.; Hornberger, R.; Greff, Z.; Keri, G.; Mann, M.; Daub, H.: Large-scale Proteomics Analysis of the Human Kinome. Molecular & Cellular Proteomics 8 (7), pp. 1751 - 1764 (2009)
23.
Journal Article
Aivaliotis, M.; Macek, B.; Gnad, F.; Reichelt, P.; Mann, M.; Oesterhelt, D.: Ser/Thr/Tyr Protein Phosphorylation in the Archaeon Halobacterium salinarum-A Representative of the Third Domain of Life. PLoS ONE 4 (3), e4777, pp. [1] - [9] (2009)
24.
Journal Article
Gnad, F.; Oroshi, M.; Birney, E.; Mann, M.: MAPU 2.0: high-accuracy proteomes mapped to genomes. Nucleic Acids Research 37 (Sp. Iss. Sp. Iss. SI), pp. D902 - D906 (2009)
25.
Journal Article
Zanivan, S.; Gnad, F.; Wickström, S. A.; Geiger, T.; Macek, B.; Cox, J.; Fässler, R.; Mann, M.: Solid Tumor Proteome and Phosphoproteome Analysis by High Resolution Mass Spectrometry. Journal of Proteome Research 7 (12), pp. 5314 - 5326 (2008)
26.
Journal Article
Pan, C.; Gnad, F.; Olsen, J. V.; Mann, M.: Quantitative phosphoproteome analysis of a mouse liver cell line reveals specificity of phosphatase inhibitors. PROTEOMICS 8 (21), pp. 4534 - 4546 (2008)
27.
Journal Article
Soufi, B.; Gnad, F.; Jensen, P. R.; Petranovic, D.; Mann, M.; Mijakovic, I.; Macek, B.: The Ser/Thr/Tyr phosphoproteome of Lactococcus lactis IL1403 reveals multiply phosphorylated proteins. PROTEOMICS 8 (17), pp. 3486 - 3493 (2008)
28.
Journal Article
Daub, H.; Olsen, J. V.; Bairlein, M.; Gnad, F.; Oppermann, F. S.; Körner, R.; Greff, Z.; Keri, G.; Stemmann, O.; Mann, M.: Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle. Molecular Cell 31 (3), pp. 438 - 448 (2008)
29.
Journal Article
Mann, K.; Olsen, J. V.; Macek, B.; Gnad, F.; Mann, M.: Identification of new chicken egg proteins by mass spectrometry-based proteomic analysis. Worlds Poultry Science Journal 64 (2), pp. 209 - 218 (2008)
30.
Journal Article
Mathivanan, S.; Ahmed, M.; Ahn, N. G.; Alexandre, H.; Amanchy, R.; Andrews, P. C.; Bader, J. S.; Balgley, B. M.; Bantscheff, M.; Bennett, K. L. et al.; Bjorling, E.; Blagoev, B.; Bose, R.; Brahmachari, S. K.; Burlingame, A. S.; Bustelo, X. R.; Cagney, G.; Cantin, G. T.; Cardasis, H. L.; Celis, J. E.; Chaerkady, R.; Chu, F. X.; Cole, P. A.; Costello, C. E.; Cotter, R. J.; Crockett, D.; DeLany, J. P.; De Marzo, A. M.; DeSouza, L. V.; Deutsch, E. W.; Dransfield, E.; Drewes, G.; Droit, A.; Dunn, M. J.; Elenitoba-Johnson, K.; Ewing, R. M.; Van Eyk, J.; Faca, V.; Falkner, J.; Fang, X. M.; Fenselau, C.; Figeys, D.; Gagne, P.; Gelfi, C.; Gevaert, K.; Gimble, J. M.; Gnad, F.; Goel, R.; Gromov, P.; Hanash, S. M.; Hancock, W. S.; Harsha, H. C.; Hart, G.; Hays, F.; He, F. C.; Hebbar, P.; Helsens, K.; Hermeking, H.; Hide, W.; Hjerno, K.; Hochstrasser, D. F.; Hofmann, O.; Horn, D. M.; Hruban, R. H.; Ibarrola, N.; James, P.; Jensen, O. N.; Jensen, P. H.; Jung, P.; Kandasamy, K.; Kheterpal, I.; Kikuno, R. F.; Korf, U.; Körner, R.; Kuster, B.; Kwon, M. S.; Lee, H. J.; Lee, Y. J.; Lefevre, M.; Lehvaslaiho, M.; Lescuyer, P.; Levander, F.; Lim, M. S.; Lobke, C.; Loo, J. A.; Mann, M.; Martens, L.; Martinez-Heredia, J.; McComb, M.; McRedmond, J.; Mehrle, A.; Menon, R.; Miller, C. A.; Mischak, H.; Mohan, S. S.; Mohmood, R.; Molina, H.; Moran, M. F.; Morgan, J. D.; Moritz, R.: Human Proteinpedia enables sharing of human protein data. Nature Biotechnology 26 (2), pp. 164 - 167 (2008)
31.
Journal Article
Macek, B.; Gnad, F.; Soufi, B.; Kumar, C.; Olsen, J. V.; Mijakovi, I.; Mann, M.: Phosphoproteome Analysis of E. coli Reveals Evolutionary Conservation of Bacterial Ser/Thr/Tyr Phosphorylation. Molecular & Cellular Proteomics 7 [2008] (2), pp. 299 - 307 (2007)
32.
Journal Article
Gnad, F.; Ren, S. B.; Cox, J.; Olsen, J. V.; Macek, B.; Oroshi, M.; Mann, M.: PHOSIDA (phosphorylation site database): management, structural and evolutionary investigation, and prediction of phosphosites. Genome Biology 8 (11), R250 (2007)
33.
Journal Article
Macek, B.; Mijakovic, I.; Olsen, J. V.; Gnad, F.; Kumar, C.; Jensen, P.R.; Mann, M.: The Serine/Threonine/Tyrosine Phosphoproteome of the Model Bacterium Bacillus subtilis. Molecular & Cellular Proteomics 6 (4), pp. 697 - 707 (2007)
34.
Journal Article
Mann, K.; Olsen, J. V.; Macek, B.; Gnad, F.; Mann, M.: Phosphoproteins of the chicken eggshell calcified layer. PROTEOMICS 7 (1), pp. 106 - 115 (2007)
35.
Journal Article
Olsen, J. V.; Blagoev, B.; Gnad, F.; Macek, B.; Kumar, C.; Mortensen, P.; Mann, M.: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. Cell 127 (3), pp. 635 - 648 (2006)
36.
Journal Article
Gnad, F.; Parsch, J.: Sebida: a database for the functional and evolutionary analysis of genes with sex-biased expression. Bioinformatics 22 (20), pp. 2577 - 2579 (2006)

Thesis - PhD (1)

37.
Thesis - PhD
Gnad, F.: Bioinformatics of Phosphoproteomics. Dissertation, Ludwig-Maximilians-Universität, München (2008)
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