Publications of Oezge Karayel
All genres
Journal Article (25)
1.
Journal Article
Quantitative multiorgan proteomics of fatal COVID-19 uncovers tissue-specific effects beyond inflammation. Embo Molecular Medicine, e17459 (2023)
2.
Journal Article
11, e77937 (2022)
Modular UBE2H-CTLH E2-E3 complexes regulate erythroid maturation. eLife 3.
Journal Article
21 (9), 100279 (2022)
Rapid and In-Depth Coverage of the (Phospho-) Proteome With Deep Libraries and Optimal Window Design for dia-PASEF. Molecular and Cellular Proteomics 4.
Journal Article
33, 100836 (2022)
Analysis of RANK-c interaction partners identifies TRAF3 as a critical regulator of breast cancer aggressiveness. Neoplasia 5.
Journal Article
29 (8), pp. 1273 - 1287 (2022)
Temporal resolution of gene derepression and proteome changes upon PROTAC-mediated degra-dation of BCL11A protein in erythroid cells. Cell Chemical Biology 6.
Journal Article
13 (1), 3041 (2022)
Cryo-EM structures of Gid12-bound GID E3 reveal steric blockade as a mechanism inhibiting substrate ubiquitylation. Nature Communications 7.
Journal Article
20 (5), e3001636 (2022)
The structural context of posttranslational modifications at a proteome-wide scale. PLoS Biology 8.
Journal Article
23, e53835 (2022)
A GID E3 ligase assembly ubiquitinates an Rsp5 E3 adaptor and regulates plasma membrane transporters. EMBO Reports 9.
Journal Article
3 (6), 100661 (2022)
Proteome profiling of cerebrospinal fluid reveals biomarker candidates for Parkinson's disease. Cell Reports Medicine 10.
Journal Article
15 (723), eabk3083 (2022)
Phosphorylation of serine-893 in CARD11 suppresses the formation and activity of the CARD11-BCL10-MALT1 complex in T and B cells. Science Signaling 11.
Journal Article
Ubiquitinomics: History, methods, and applications in basic research and drug discovery. Proteomics, e2200074 (2022)
12.
Journal Article
79 (2), 112 (2022)
A20 and ABIN-1 cooperate in balancing CBM complex-triggered NF-kappa B signaling in activated T cells. Cellular and Molecular Life Sciences 13.
Journal Article
12 (1), 254 (2021)
Data-independent acquisition method for ubiquitinome analysis reveals regulation of circadian biology. Nature Communications 14.
Journal Article
17, pp. 272 - 279 (2021)
Linkage-specific ubiquitin chain formation depends on a lysine hydrocarbon ruler. Nature Chemical Biology 15.
Journal Article
81 (11), pp. 2445 - 2459.e13 (2021)
GID E3 ligase supramolecular chelate assembly configures multipronged ubiquitin targeting of an oligomeric metabolic enzyme. Molecular Cell 16.
Journal Article
594 (7862), pp. 246 - 252 (2021)
Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV. Nature 17.
Journal Article
13 (3), e13257 (2021)
Urinary proteome profiling for stratifying patients with familial Parkinson's disease. Embo Molecular Medicine 18.
Journal Article
117 (51), 202020197 (2020)
DIA-based systems biology approach unveils E3 ubiquitin ligase-dependent responses to a metabolic shift. Proceedings of the National Academy of Sciences of the United States of America 19.
Journal Article
19 (9), pp. 1546 - 1560 (2020)
Accurate MS-based Rab10 Phosphorylation Stoichiometry Determination as Readout for LRRK2 Activity in Parkinson's Disease. Molecular and Cellular Proteomics 20.
Journal Article
16 (12), e9813 (2020)
Integrative proteomics reveals principles of dynamic phosphosignaling networks in human erythropoiesis. Molecular Systems Biology