Publications of Falk Butter

Journal Article (17)

1.
Journal Article
Ericson, M.; Janes, M. A.; Butter, F.; Mann, M.; Ullu, E.; Tschudi, C.: On the extent and role of the small proteome in the parasitic eukaryote Trypanosoma brucei. BMC BIOLOGY 12, 14 (2014)
2.
Journal Article
Hornburg, D.; Drepper, C.; Butter, F.; Meissner, F.; Sendtner, M.; Mann, M.: Deep proteomic evaluation of primary and cell line motoneuron disease models delineates major differences in neuronal characteristics. Molecular & cellular proteomics: MCP 13 (12), pp. 3410 - 3420 (2014)
3.
Journal Article
Sharma, N. L.; Massie, C. E.; Butter, F.; Mann, M.; Bon, H.; Ramos-Montoya, A.; Menon, S.; Stark, R.; Lamb, A. D.; Scott, H. E. et al.; Warren, A. Y.; Neal, D. E.; Mills, I. G.: The ETS family member GABP alpha modulates androgen receptor signalling and mediates an aggressive phenotype in prostate cancer. NUCLEIC ACIDS RESEARCH 42 (10), pp. 6256 - 6269 (2014)
4.
Journal Article
Scheibe, M.; Arnoult, N.; Kappei, D.; Buchholz, F.; Decottignies, A.; Butter, F.; Mann, M.: Quantitative interaction screen of telomeric repeat-containing RNA reveals novel TERRA regulators. GENOME RESEARCH 23 (12), pp. 2149 - 2157 (2013)
5.
Journal Article
Viturawong, T.; Meissner, F.; Butter, F.; Mann, M.: A DNA-Centric Protein Interaction Map of Ultraconserved Elements Reveals Contribution of Transcription Factor Binding Hubs to Conservation. CELL REPORTS 5 (2), pp. 531 - 545 (2013)
6.
Journal Article
Klass, D. M.; Scheibe, M.; Butter, F.; Hogan, G. J.; Mann, M.; Brown, P. O.: Quantitative proteomic analysis reveals concurrent RNA-protein interactions and identifies new RNA-binding proteins in Saccharomyces cerevisiae. GENOME RESEARCH 23 (6), pp. 1028 - 1038 (2013)
7.
Journal Article
Butter, F.; Bucerius, F.; Michel, M.; Cicova, Z.; Mann, M.; Janzen, C. J.: Comparative Proteomics of Two Life Cycle Stages of Stable Isotope-labeled Trypanosoma brucei Reveals Novel Components of the Parasite's Host Adaptation Machinery. MOLECULAR & CELLULAR PROTEOMICS 12 (1), pp. 172 - 179 (2013)
8.
Journal Article
Kappei, D.; Butter, F.; Benda, C.; Scheibe, M.; Draskovic, I.; Stevense, M.; Novo, C. L.; Basquin, C.; Araki, M.; Araki, K. et al.; Krastev, D. B.; Kittler, R.; Jessberger, R.; Londono-Vallejo, J. A.; Mann, M.; Buchholz, F.: HOT1 is a mammalian direct telomere repeat-binding protein contributing to telomerase recruitment. EMBO JOURNAL 32 (12), pp. 1681 - 1701 (2013)
9.
Journal Article
Powers, N. R.; Eicher, J. D.; Butter, F.; Kong, Y.; Miller, L. L.; Ring, S. M.; Mann, M.; Gruen, J. R.: Alleles of a Polymorphic ETV6 Binding Site in DCDC2 Confer Risk of Reading and Language Impairment. AMERICAN JOURNAL OF HUMAN GENETICS 93 (1), pp. 19 - 28 (2013)
10.
Journal Article
Scheibe, M.; Butter, F.; Hafner, M.; Tuschl, T.; Mann, M.: Quantitative mass spectrometry and PAR-CLIP to identify RNA-protein interactions. NUCLEIC ACIDS RESEARCH 40 (19), pp. 9897 - 9902 (2012)
11.
Journal Article
Butter, F.; Davison, L.; Viturawong, T.; Scheibe, M.; Vermeulen, M.; Todd, J. A.; Mann, M.: Proteome-Wide Analysis of Disease-Associated SNPs That Show Allele-Specific Transcription Factor Binding. PLOS GENETICS 8 (9), e1002982 (2012)
12.
Journal Article
Gregory, A. P.; Dendrou, C. A.; Attfield, K. E.; Haghikia, A.; Xifara, D. K.; Butter, F.; Poschmann, G.; Kaur, G.; Lambert, L.; Leach, O. A. et al.; Promel, S.; Punwani, D.; Felce, J. H.; Davis, S. J.; Gold, R.; Nielsen, F. C.; Siegel, R. M.; Mann, M.; Bell, J. I.; McVean, G.; Fugger, L.: TNF receptor 1 genetic risk mirrors outcome of anti-TNF therapy in multiple sclerosis. Nature 488 (7412), pp. 508 - 511 (2012)
13.
Journal Article
Vermeulen, M.; Eberl, H. C.; Matarese, F.; Marks, H.; Denissov, S.; Butter, F.; Lee, K. K.; Olsen, J. V.; Hyman, A. A.; Stunnenberg, H. G. et al.; Mann, M.: Quantitative Interaction Proteomics and Genome-wide Profiling of Epigenetic Histone Marks and Their Readers. Cell 142 (6), pp. 967 - 980 (2010)
14.
Journal Article
Butter, F.; Kappei, D.; Buchholz, F.; Vermeulen, M.; Mann, M.: A domesticated transposon mediates the effects of a single-nucleotide polymorphism responsible for enhanced muscle growth. EMBO Reports 11 (4), pp. 305 - 311 (2010)
15.
Journal Article
Butter, F.; Scheibe, M.; Mörl, M.; Mann, M.: Unbiased RNA-protein interaction screen by quantitative proteomics. Proceedings of the National Academy of Sciences of the United States of America 106 (26), pp. 10626 - 10631 (2009)
16.
Journal Article
Mittler, G.; Butter, F.; Mann, M.: A SILAC-based DNA protein interaction screen that identifies candidate binding proteins to functional DNA elements. Genome Research 19 (2), pp. 284 - 293 (2009)
17.
Journal Article
Olsen, J. V.; Butter, F.; Hubner, N.; Cox, J.; Hyman, A.; Mann, M.: SILAC based quantitative proteomics to determine specific protein-protein and protein-DNA interactions. FEBS Journal 275 (Suppl. Suppl. 1), p. 29 - 29 (2008)

Meeting Abstract (1)

18.
Meeting Abstract
Wilson, N.; Butter, F.; Calero-Nieto, F.; Vidal, I. F.; Kinston, S.; Merkenschlager, M.; Mann, M.; Gottgens, B.: INTERROGATING THE RELATIONSHIP BETWEEN TRANSCRIPTION FACTOR COMPLEX BINDING AND TRANSCRIPTIONAL ACTIVATION. In EXPERIMENTAL HEMATOLOGY, 41 (8), p. S19 - S19. 42nd Annual Scientific Meeting of the International-Society-for-Experimental-Hematology-and-Stem-Cells (ISEH), Vienna, AUSTRIA, August 22, 2013 - August 25, 2013. ELSEVIER SCIENCE INC, 360 PARK AVE SOUTH, NEW YORK, NY 10010-1710 USA (2013)

Thesis - PhD (1)

19.
Thesis - PhD
Butter, F.: Quantitative mass spectrometry to study nucleic acid protein interactions. Dissertation, Ludwig-Maximilians-Universität, München (2010)
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