Publications of Jürgen Cox
All genres
Journal Article (138)
41.
Journal Article
13 (10), 949 (2017)
Lysine acetylome profiling uncovers novel histone deacetylase substrate proteins in Arabidopsis. Molecular Systems Biology 42.
Journal Article
43, pp. 141 - 146 (2017)
What computational non-targeted mass spectrometry-based metabolomics can gain from shotgun proteomics. Current Opinion in Biotechnology 43.
Journal Article
32 (5), pp. 380 - 393 (2017)
Guidelines for Genome-Scale Analysis of Biological Rhythms. Journal of Biological Rhythms 44.
Journal Article
20 (11), pp. 2706 - 2718 (2017)
A Mass Spectrometry-Based Approach for Mapping Protein Subcellular Localization Reveals the Spatial Proteome of Mouse Primary Neurons. Cell Reports 45.
Journal Article
7, 13404 (2016)
Direct identification of clinically relevant neoepitopes presented on native human melanoma tissue by mass spectrometry. Nature Communications 46.
Journal Article
7, 13250 (2016)
Glucose-regulated and drug-perturbed phosphoproteome reveals molecular mechanisms controlling insulin secretion. Nature Communications 47.
Journal Article
15 (8), pp. 2769 - 2778 (2016)
Quantitative Cross-linking/Mass Spectrometry Using Isotope-labeled Cross-linkers and MaxQuant. Molecular and Cellular Proteomics 48.
Journal Article
5, e16950 (2016)
Global, quantitative and dynamic mapping of protein subcellular localization. eLife 49.
Journal Article
8, 44 (2016)
Ultra-deep and quantitative saliva proteome reveals dynamics of the oral microbiome. GENOME MEDICINE 50.
Journal Article
69 (5), pp. 942 - 952 (2016)
The Proteome of Primary Prostate Cancer. EUROPEAN UROLOGY 51.
Journal Article
32 (3), pp. 424 - 431 (2016)
IKAP: A heuristic framework for inference of kinase activities from Phosphoproteomics data. BIOINFORMATICS 52.
Journal Article
32 (9), pp. 1417 - 1419 (2016)
Homology-driven assembly of NOn-redundant protEin sequence sets (NOmESS) for mass spectrometry. Bioinformatics 53.
Journal Article
7, 10259 (2016)
Proteomic maps of breast cancer subtypes. NATURE COMMUNICATIONS 54.
Journal Article
11 (12), pp. 2301 - 2319 (2016)
The MaxQuant computational platform for mass spectrometry-based shotgun proteomics. Nature Protocols 55.
Journal Article
13 (9), pp. 731 - 740 (2016)
The Perseus computational platform for comprehensive analysis of (prote)omics data. Nature methods 56.
Journal Article
14 (7), pp. 2014 - 2029 (2015)
The Impact II, a Very High-Resolution Quadrupole Time-of-Flight Instrument (QTOF) for Deep Shotgun Proteomics. MOLECULAR & CELLULAR PROTEOMICS 57.
Journal Article
14 (11), pp. 2947 - 2960 (2015)
Machine Learning-based Classification of Diffuse Large B-cell Lymphoma Patients by Their Protein Expression Profiles. MOLECULAR & CELLULAR PROTEOMICS 58.
Journal Article
14 (11), pp. 4885 - 4895 (2015)
Secretome Analysis of Lipid-Induced Insulin Resistance in Skeletal Muscle Cells by a Combined Experimental and Bioinformatics Workflow. JOURNAL OF PROTEOME RESEARCH 59.
Journal Article
14 (4), pp. 841 - 853 (2015)
Deep Proteomics of Mouse Skeletal Muscle Enables Quantitation of Protein Isoforms, Metabolic Pathways, and Transcription Factors. MOLECULAR & CELLULAR PROTEOMICS 60.
Journal Article
163 (3), pp. 712 - 723 (2015)
A Human Interactome in Three Quantitative Dimensions Organized by Stoichiometries and Abundances. CELL