Publications of Alexander Auer

Journal Article (9)

Journal Article
Huijben, T. A. P. M.; Heydarian, H.; Auer, A.; Schueder, F.; Jungmann, R.; Stallinga, S.; Rieger, B.: Detecting structural heterogeneity in single-molecule localization microscopy data. Nature Communications 12 (1), 3791 (2021)
Journal Article
Auer, A.; Strauss, M. T.; Strauss, S.; Jungmann, R.: nanoTRON: a Picasso module for MLP-based classification of super-resolution data. BIOINFORMATICS 36 (11), pp. 3620 - 3622 (2020)
Journal Article
Wickham, S. F. J.; Auer, A.; Min, J.; Ponnuswamy, N.; Woehrstein, J. B.; Schueder, F.; Strauss, M. T.; Schnitzbauer, J.; Nathwani, B.; Zhao, Z. et al.; Perrault, S. D.; Hahn, J.; Lee, S.; Bastings, M. M.; Helmig, S. W.; Kodal, A. L.; Yin, P.; Jungmann, R.; Shih, W. M.: Complex multicomponent patterns rendered on a 3D DNA-barrel pegboard. Nature Communications 11 (1), 5768 (2020)
Journal Article
Schlichthaerle, T.; Ganji, M.; Auer, A.; Wade, O. K.; Jungmann, R.: Bacterially Derived Antibody Binders as Small Adapters for DNA‐PAINT Microscopy. ChemBioChem: A European Journal of Chemical Biology 20 (8), pp. 1032 - 1038 (2019)
Journal Article
Schlichthaerle, T.; Strauss, M. T.; Schueder, F.; Auer, A.; Nijmeijer, B.; Kueblbeck, M.; Sabinina, V. J.; Thevathasan V, J.; Ries, J.; Ellenberg, J. et al.; Jungmann, R.: Direct visualization of single nuclear pore complex proteins using genetically-encoded probes for DNA-PAINT. Angewandte Chemie International Edition 58 (37, SI), pp. 13004 - 13008 (2019)
Journal Article
Schueder, F.; Stein, J.; Stehr, F.; Auer, A.; Sperl, B.; Strauss, M. T.; Schwille, P.; Jungmann, R.: An order of magnitude faster DNA-PAINT imaging by optimized sequence design and buffer conditions. Nature Methods 16 (11), pp. 1101 - 1104 (2019)
Journal Article
Auer, A.; Schlichthaerle, T.; Woehrstein, J. B.; Schueder, F.; Strauss, M. T.; Grabmayr, H.; Jungmann, R.: Nanometer-scale Multiplexed Super-Resolution Imaging with an Economic 3D-DNA-PAINT Microscope. ChemPhysChem 19 (22), pp. 3024 - 3034 (2018)
Journal Article
Deussner-Helfmann, N. S.; Auer, A.; Strauss, M. T.; Malkusch, S.; Dietz, M. S.; Barth, H. -.; Jungmann, R.; Heilemann, M.: Correlative Single-Molecule FRET and DNA-PAINT Imaging. Nano Letters 18 (7), pp. 4626 - 4630 (2018)
Journal Article
Auer, A.; Strauss, M. T.; Schlichthaerle, T.; Jungmann, R.: Fast, Background-Free DNA-PAINT Imaging Using FRET-Based Probes. Nano Letters 17 (10), pp. 6428 - 6434 (2017)

Meeting Abstract (2)

Meeting Abstract
Deussner-Helfmann, N. S.; Auer, A.; Strauss, M. T.; Donlin-Asp, P.; Malkusch, S.; Dietz, M. S.; Barth, H.-D.; Schuman, E.; Jungmann, R.; Heilemann, M.: Correlating DNA-PAINT and single-molecule FRET for multiplexed super-resolution imaging. In Proceedings of SPIE, 11246, 112460L. SPIE BiOS, San Francisco, CA, February 01, 2020 - February 06, 2020. SPIE, Bellingham, Washington (2020)
Meeting Abstract
Deussner-Helfmann, N.; Auer, A.; Strauss, M.; Malkusch, S.; Dietz, M.; Barth, H. D.; Jungmann, R.; Heilemann, M.: Multiplexed single-molecule fluorescence imaging by FRET-PAINT. In European Biophysics Journal with Biophysics Letters, 48 (Suppl. 1), p. S202 - S202. Joint 12th EBSA European Biophysics Congress / 10th IUPAP International Conference on Biological Physics (ICBP), Madrid, SPAIN, July 20, 2019 - July 24, 2019. Springer, Berlin (2019)

Thesis - PhD (1)

Thesis - PhD
Auer, A.: Developments of molecular tools for DNA sequencing using super-resolution microscopy. Dissertation, Ludwig-Maximilians-Universität München, Fakultät für Physik, München (2022)

Thesis - Master (1)

Thesis - Master
Auer, A.: Advancements in Multiplexed 3D Super-Resolution and FRET-based Probes. Master, Ludwig Maximilians Universität, München (2016)
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