Publications of Matthias Mann

Voytik, E.; Bludau, I.; Willems, S.; Hansen, F. M.; Brunner, A.-D.; Strauss, M. T.; Mann, M.: AlphaMap: An open-source Python package for the visual annotation of proteomics data with sequence-specific knowledge. Bioinformatics 38 (3), pp. 849 - 852 (2022)

Cho, N. H.; Cheveralls, K. C.; Brunner, A.-D.; Kim, K.; Michaelis, A. C.; Raghavan, P.; Kobayashi, H.; Savy, L.; Li, J. Y.; Canaj, H. et al.; Kim, J. Y. S.; Stewart, E. M.; Gnann, C.; McCarthy, F.; Cabrera, J. P.; Brunetti, R. M.; Chhun, B. B.; Dingle, G.; Hein, M. Y.; Huang, B.; Mehta, S. B.; Weissman, J. S.; Gomez-Sjoberg, R.; Itzhak, D. N.; Royer, L. A.; Mann, M.; Leonetti, M. D.: OpenCell: Endogenous tagging for the cartography of human cellular organization. Science 375 (6585), eabi6983 (2022)

Dichtl, S.; Sanin, D. E.; Koss, C. K.; Willenborg, S.; Petzold, A.; Tanzer, M. C.; Dahl, A.; Kabat, A. M.; Lindenthal, L.; Zeitler, L. et al.; Satzinger, S.; Strasser, A.; Mann, M.; Roers, A.; Eming, S. A.; El Kasmi, K. C.; Pearce, E. J.; Murray, P. J.: Gene-selective transcription promotes the inhibition of tissue reparative macrophages by TNF. Life science alliance 5 (4), e202101315 (2022)

Fredman, G.; Skov, L.; Mann, M.; Dyring-Andersen, B.: Towards Precision Dermatology: Emerging Role of Proteomic Analysis of the Skin. Dermatology 238 (2), pp. 185 - 194 (2022)

Jayavelu, A. K.; Wolf, S.; Buettner, F.; Alexe, G.; Haeupl, B.; Comoglio, F.; Schneider, C.; Doebele, C.; Fuhrmann, D. C.; Wagner, S. et al.; Donato, E.; Andresen, C.; Wilke, A. C.; Zindel, A.; Jahn, D.; Splettstoesser, B.; Plessmann, U.; Muench, S.; Abou-El-Ardat, K.; Makowka, P.; Acker, F.; Enssle, J. C.; Cremer, A.; Schnutgen, F.; Kurrle, N.; Chapuy, B.; Loeber, J.; Hartmann, S.; Wild, P. J.; Wittig, I.; Huebschmann, D.; Kaderali, L.; Cox, J.; Bruene, B.; Roellig, C.; Thiede, C.; Steffen, B.; Bornhaeuser, M.; Trumpp, A.; Urlaub, H.; Stegmaier, K.; Serve, H.; Mann, M.; Oellerich, T.: The proteogenomic subtypes of acute myeloid leukemia. Cancer Cell 40 (3), pp. 301 - 317.e12 (2022)

Kaufmann, M.; Schaupp, A.-L.; Sun, R.; Coscia, F.; Dendrou, C. A.; Cortes, A.; Kaur, G.; Evans, H. G.; Mollbrink, A.; Navarro, J. F. et al.; Sonner, J. K.; Mayer, C.; DeLuca, G. C.; Lundeberg, J.; Matthews, P. M.; Attfield, K. E.; Friese, M. A.; Mann, M.; Fugger, L.: Identification of early neurodegenerative pathways in progressive multiple sclerosis. Nature Neuroscience 25, pp. 944 - 955 (2022)

Linster, E.; Ruiz, F. L. F.; Miklankova, P.; Ruppert, T.; Müller, J.; Armbruster, L.; Gong, X.; Serino, G.; Mann, M.; Hell, R. et al.; Wirtz, M.: Cotranslational N-degron masking by acetylation promotes proteome stability in plants. Nature Communications 13 (1), 810 (2022)

Miklánková, P.; Linster, E.; Boyer, J.-B.; Weidenhausen, J.; Müller, J.; Armbruster, L.; Lapouge, K.; De La Torre, C.; Bienvenut, W.; Sticht, C. et al.; Mann, M.; Meinnel, T.; Sinning, I.; Giglione, C.; Hell, R.; Wirtz, M.: HYPK promotes the activity of theNα-acetyltransferase A complex to determine proteostasis of nonAc-X2/N-degron–containing proteins. Science Advances 8, eabn6153 (2022)

Santos, A.; Colaco, A. R.; Nielsen, A. B.; Niu, L.; Strauss, M.; Geyer, P. E.; Coscia, F.; Albrechtsen, N. J. W.; Mundt, F.; Jensen, L. J. et al.; Mann, M.: A knowledge graph to interpret clinical proteomics data. Nature Biotechnology 40, pp. 692 - 702 (2022)

Stafford, C. A.; Gassauer, A.-M.; de Oliveira Mann, C. C.; Tanzer, M. C.; Fessler, E.; Wefers, B.; Nagl, D.; Kuut, G.; Sulek, K.; Vasilopoulou, C. et al.; Schwojer, S. J.; Wiest, A.; Pfautsch, M. K.; Wurst, W.; Yabal, M.; Fröhlich, T.; Mann, M.; Gisch, N.; Jae, L. T.; Hornung, V.: Phosphorylation of muramyl peptides by NAGK is required for NOD2 activation. Nature 609, pp. 590 - 596 (2022)

Yin, H.; Karayel, O.; Chao, Y.-Y.; Seeholzer, T.; Hamp, I.; Plettenburg, O.; Gehring, T.; Zielinski, C.; Mann, M.; Krappmann, D.: A20 and ABIN-1 cooperate in balancing CBM complex-triggered NF-kappa B signaling in activated T cells. Cellular and Molecular Life Sciences 79 (2), 112 (2022)

Haider, N.; Lebastchi, J.; Jayavelu, A. K.; Batista, T. M.; Pan, H.; Dreyfuss, J. M.; Carcamo-Orive, I.; Knowles, J. W.; Mann, M.; Kahn, C. R.: Signaling defects associated with insulin resistance in nondiabetic and diabetic individuals and modification by sex. Journal of Clinical Investigation 131 (21), e151818 (2021)

Zhu, Y.; Aebersold, R.; Mann, M.; Guo, T.: SnapShot: Clinical proteomics. Cell 184 (18), pp. 4840 - 4840.e1 (2021)

Voronina, L.; Leonardo, C.; Müller-Reif, J. B.; Geyer, P. E.; Huber, M.; Trubetskov, M.; Kepesidis, K. V.; Behr, J.; Mann, M.; Krausz, F. et al.; Zigman, M.: Molecular origin of blood-based infrared spectroscopic fingerprints. Angewandte Chemie International Edition 60 (31), pp. 17060 - 17069 (2021)

Wigger, L.; Barovic, M.; Brunner, A.-D.; Marzetta, F.; Schoeniger, E.; Mehl, F.; Kipke, N.; Friedland, D.; Burdet, F.; Kessler, C. et al.; Lesche, M.; Thorens, B.; Bonifacio, E.; Legido-Quigley, C.; Barbier Saint Hilaire, P.; Delerive, P.; Dahl, A.; Klose, C.; Gerl, M. J.; Simons, K.; Aust, D.; Weitz, J.; Distler, M.; Schulte, A. M.; Mann, M.; Ibberson, M.; Solimena, M.: Multi-omics profiling of living human pancreatic islet donors reveals heterogeneous beta cell trajectories towards type 2 diabetes. Nature Metabolism 3 (7), pp. 1017 - 1031 (2021)

Takahashi, M.; Lio, C.-W. J.; Campeau, A.; Steger, M.; Ay, F.; Mann, M.; Gonzalez, D. J.; Jain, M.; Sharma, S.: The tumor suppressor kinase DAPK3 drives tumor-intrinsic immunity through the STING-IFN-beta pathway. Nature Immunology 22, pp. 485 - 496 (2021)

Mayr, C. H.; Simon, L. M.; Leuschner, G.; Ansari, M.; Schniering, J.; Geyer, P. E.; Angelidis, I.; Strunz, M.; Singh, P.; Kneidinger, N. et al.; Reichenberger, F.; Silbernagel, E.; Boehm, S.; Adler, H.; Lindner, M.; Maurer, B.; Hilgendorff, A.; Prasse, A.; Behr, J.; Mann, M.; Eickelberg, O.; Theis, F. J.; Schiller, H. B.: Integrative analysis of cell state changes in lung fibrosis with peripheral protein biomarkers. Embo Molecular Medicine 13 (4), e12871 (2021)

Liwocha, J.; Krist, D. T.; van der Heden van Noort, G.J.; Hansen, F. M.; Truong, V.H.; Karayel, O.; Purser, N.; Houston, D.; Burton, N.; Bostock, M.J. et al.; Sattler, M.; Mann, M.; Harrison, J.S.; Kleiger, G.; Ovaa, H.; Schulman, B. A.: Linkage-specific ubiquitin chain formation depends on a lysine hydrocarbon ruler. Nature Chemical Biology 17, pp. 272 - 279 (2021)

Dall, M.; Hassing, A. S.; Niu, L.; Nielsen, T. S.; Ingerslev, L. R.; Sulek, K.; Trammell, S. A. J.; Gillum, M. P.; Barres, R.; Larsen, S. et al.; Poulsen, S. S.; Mann, M.; Orskov, C.; Treebak, J. T.: Hepatocyte-specific perturbation of NAD(+) biosynthetic pathways in mice induces reversible nonalcoholic steatohepatitis-like phenotypes. The Journal of Biological Chemistry 297 (6), 101388 (2021)

Deen, D.; Butter, F.; Daniels, D. E.; Ferrer-Vicens, I.; Ferguson, D. C. J.; Holland, M. L.; Samara, V.; Sloane-Stanley, J. A.; Ayyub, H.; Mann, M. et al.; Frayne, J.; Garrick, D.; Vernimmen, D.: Identification of the transcription factor MAZ as a regulator of erythropoiesis. Blood Advances 5 (15), pp. 3002 - 3015 (2021)