Publications of M. Mann

Mortensen, P.; Gouw, J. W.; Olsen, J. V.; Ong, S. E.; Rigbolt, K. T. G.; Bunkenborg, J.; Cox, J.; Foster, L. J.; Heck, A. J. R.; Blagoev, B. et al.; Andersen, J. S.; Mann, M.: MSQuant, an Open Source Platform for Mass Spectrometry-Based Quantitative Proteomics. Journal of Proteome Research 9 (1), pp. 393 - 403 (2010)

Oren, Y. S.; Geiger, T.; Mann, M.; Kerem, B.: THE EFFECT OF THE UPR AND NMD MECHANISMS ON THE RESPONSE TO READTHROUGH TREATMENT. Pediatric Pulmonology (Suppl. 33), p. 227 - 227 (2010)

Hirtreiter, A. M.; Calloni, G.; Forner, F.; Scheibe, B.; Puype, M.; Vandekerckhove, J.; Mann, M.; Hartl, F. U.; Hayer-Hartl, M.: Differential substrate specificity of group I and group II chaperonins in the archaeon Methanosarcina mazei. Molecular Microbiology 74 (5), pp. 1152 - 1168 (2009)

Olsen, J. V.; Schwartz, J. C.; Griep-Raming, J.; Nielsen, M. L.; Damoc, E.; Denisov, E.; Lange, O.; Remes, P.; Taylor, D.; Splendore, M. et al.; Wouters, E. R.; Senko, M.; Makarov, A.; Mann, M.; Horning, S.: A Dual Pressure Linear Ion Trap Orbitrap Instrument with Very High Sequencing Speed. Molecular & Cellular Proteomics 8 (12), pp. 2759 - 2769 (2009)

Pan, C. P.; Olsen, J. V.; Daub, H.; Mann, M.: Global Effects of Kinase Inhibitors on Signaling Networks Revealed by Quantitative Phosphoproteomics. Molecular & Cellular Proteomics 8 (12), pp. 2796 - 2808 (2009)

Wisniewski, J. R.; Zougman, A.; Mann, M.: Combination of FASP and StageTip-Based Fractionation Allows In-Depth Analysis of the Hippocampal Membrane Proteome. Journal of Proteome Research 8 (12), pp. 5674 - 5678 (2009)

Waanders, L. F.; Chwalek, K.; Monetti, M.; Kumar, C.; Lammert, E.; Mann, M.: Quantitative proteomic analysis of single pancreatic islets. Proceedings of the National Academy of Sciences of the United States of America 106 (45), pp. 18902 - 18907 (2009)

Wisniewski, J. R.; Mann, M.: Spin filter-based sample preparation for shotgun proteomics Reply. Nature Methods 6 (11), pp. 785 - 786 (2009)

Choudhary, C.; Olsen, J. V.; Brandts, C.; Cox, J.; Reddy, P. N. G.; Boehmer, F. D.; Gerke, V.; Schmidt-Arras, D. E.; Berdel, W. E.; Mueller-Tidow, C. et al.; Mann, M.; Serve, H.: Mislocalized Activation of Oncogenic RTKs Switches Downstream Signaling Outcomes. Molecular Cell 36 (2), pp. 326 - 339 (2009)

Forner, F.; Kumar, C.; Luber, C. A.; Fromme, T.; Klingenspor, M.; Mann, M.: Proteome Differences between Brown and White Fat Mitochondria Reveal Specialized Metabolic Functions. Cell Metabolism 10 (4), pp. 324 - 335 (2009)

Gnad, F.; de Godoy, L. M. F.; Cox, J.; Neuhauser, N.; Ren, S.; Olsen, J. V.; Mann, M.: High-accuracy identification and bioinformatic analysis of in vivo protein phosphorylation sites in yeast. Proteomics 9 (20), pp. 4642 - 4652 (2009)

Mann, M.: Comparative analysis to guide quality improvements in proteomics. Nature Methods 6 (10), pp. 717 - 719 (2009)

Soufi, B.; Olsen, J. V.; Gnad, F.; Kumar, C.; Mann, M.; Mijakovic, I.; Macek, B.: Organization and dynamics of the bacterial Ser/Thr/Tyr phosphoproteome. Amino Acids 37 (4), p. 763 - 763 (2009)

Lu, A. P.; Zougman, A.; Pudelko, M.; Bebenek, M.; Ziolkowski, P.; Mann, M.; Wisniewski, J. R.: Mapping of Lysine Monomethylation of Linker Histones in Human Breast and Its Cancer. Journal of Proteome Research 8 (9), pp. 4207 - 4215 (2009)

Choudhary, C.; Kumar, C.; Gnad, F.; Nielsen, M. L.; Rehman, M.; Walther, T. C.; Olsen, J. V.; Mann, M.: Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions. Science 325 (5942), pp. 834 - 840 (2009)

Cox, J.; Mann, M.: Computational Principles of Determining and Improving Mass Precision and Accuracy for Proteome Measurements in an Orbitrap. Journal of the American Society for Mass Spectrometry 20 (8), pp. 1477 - 1485 (2009)

Hilger, M.; Bonaldi, T.; Gnad, F.; Mann, M.: Systems-wide Analysis of a Phosphatase Knock-down by Quantitative Proteomics and Phosphoproteomics. Molecular & Cellular Proteomics 8 (8), pp. 1908 - 1920 (2009)

Olsen, J. V.; Nielsen, M. L.; Damoc, N. E.; Griep-Raming, J.; Moehring, T.; Makarov, A.; Schwartz, J.; Horning, S.; Mann, M.: Characterization of the Velos, an Enhanced LTQ Orbitrap, for Proteomics. Molecular & Cellular Proteomics (Suppl.), p. S40 - S40 (2009)

Zielinska, D. F.; Gnad, F.; Jedrusik-Bode, M.; Wisniewski, J. R.; Mann, M.: Caenorhabditis elegans Has a Phosphoproteome Atypical for Metazoans That Is Enriched in Developmental and Sex Determination Proteins. Journal of Proteome Research 8 (8), pp. 4039 - 4049 (2009)

Nickell, S.; Beck, F.; Scheres, S. H. W.; Korinek, A.; Förster, F.; Lasker, K.; Mihalache, O.; Sun, N.; Nagy, I.; Sali, A. et al.; Plitzko, J. M.; Carazo, J. M.; Mann, M.; Baumeister, W.: Insights into the molecular architecture of the 26S proteasome. Proceedings of the National Academy of Sciences of the United States of America 106 (29), pp. 11943 - 11947 (2009)