Publications of Nina C. Hubner

Hein, M. Y.; Hubner, N. C.; Poser, I.; Cox, J.; Nagaraj, N.; Toyoda, Y.; Gak, I. A.; Weisswange, I.; Mansfeld, J.; Buchholz, F. et al.; Hyman, A. A.; Mann, M.: A Human Interactome in Three Quantitative Dimensions Organized by Stoichiometries and Abundances. CELL 163 (3), pp. 712 - 723 (2015)

Ross, K.; Sedello, A. K.; Todd, G. P.; Paszkowski-Rogacz, M.; Bird, A. W.; Ding, L.; Grinenko, T.; Behrens, K.; Hubner, N.; Mann, M. et al.; Waskow, C.; Stocking, C.; Buchholz, F.: Polycomb group ring finger 1 cooperates with Runx1 in regulating differentiation and self-renewal of hematopoietic cells. Blood 119 (18), pp. 4152 - 4161 (2012)

Elefsinioti, A.; Sarac, O. S.; Hegele, A.; Plake, C.; Hubner, N. C.; Poser, I.; Sarov, M.; Hyman, A.; Mann, M.; Schroeder, M. et al.; Stelzl, U.; Beyer, A.: Large-scale De Novo Prediction of Physical Protein-Protein Association. Molecular & Cellular Proteomics 10 (11), M111.010629, pp. [1] - [13] (2011)

Krastev, D. B.; Slabicki, M.; Paszkowski-Rogacz, M.; Hubner, N. C.; Junqueira, M.; Shevchenko, A.; Mann, M.; Neugebauer, K. M.; Buchholz, F.: A systematic RNAi synthetic interaction screen reveals a link between p53 and snoRNP assembly. Nature Cell Biology 13 (7), pp. 809 - 818 (2011)

Nitzsche, A.; Paszkowski-Rogacz, M.; Matarese, F.; Janssen-Megens, E. M.; Hubner, N. C.; Schulz, H.; de Vries, I.; Ding, L.; Huebner, N.; Mann, M. et al.; Stunnenberg, H. G.; Buchholz, F.: RAD21 Cooperates with Pluripotency Transcription Factors in the Maintenance of Embryonic Stem Cell Identity. PLoS ONE 6 (5), e19470, pp. [1] - [13] (2011)

Hubner, N. C.; Mann, M.: Extracting gene function from protein-protein interactions using Quantitative BAC InteraCtomics (QUBIC). Methods 53 (4), pp. 453 - 459 (2011)

Schnuetgen, F.; Ehrmann, F.; Poser, I.; Hubner, N. C.; Hansen, J.; Floss, T.; deVries, I.; Wurst, W.; Hyman, A.; Mann, M. et al.; von Melchner, H.: Resources for proteomics in mouse embryonic stem cells. Nature Methods 8 (2), pp. 103 - 104 (2011)

Hubner, N. C.; Bird, A. W.; Cox, J.; Splettstoesser, B.; Bandilla, P.; Poser, I.; Hyman, A.; Mann, M.: Quantitative proteomics combined with BAC TransgeneOmics reveals in vivo protein interactions. Journal of Cell Biology 189 (4), pp. 739 - 754 (2010)

Fröhlich, F.; Moreira, K.; Aguilar, P. S.; Hubner, N. C.; Mann, M.; Walter, P.; Walther, T. C.: A genome-wide screen for genes affecting eisosomes reveals Nce102 function in sphingolipid signaling. Journal of Cell Biology 185 (7), pp. 1227 - 1242 (2009)

Huang, L. F.; Jones, A. M. E.; Searle, I.; Patel, K.; Vogler, H.; Hubner, N. C.; Baulcombe, D. C.: An atypical RNA polymerase involved in RNA silencing shares small subunits with RNA polymerase II. Nature Structural & Molecular Biology 16 (1), pp. 91 - 93 (2009)

Cox, J.; Hubner, N. C.; Mann, M.: How Much Peptide Sequence Information Is Contained in Ion Trap Tandem Mass Spectra? Journal of the American Society for Mass Spectrometry 19 (12), pp. 1813 - 1820 (2008)

Hubner, N. C.; Ren, S.; Mann, M.: Peptide separation with immobilized pI strips is an attractive alternative to in-gel protein digestion for proteome analysis. PROTEOMICS 8 (23-24), pp. 4862 - 4872 (2008)

de Godoy, L. M. F.; Olsen, J. V.; Cox, J.; Nielsen, M. L.; Hubner, N. C.; Fröhlich, F.; Walther, T. C.; Mann, M.: Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast. Nature 455 (7217), pp. 1251 - 1254 (2008)

Vermeulen, M.; Hubner, N. C.; Mann, M.: High confidence determination of specific protein-protein interactions using quantitative mass spectrometry. Current Opinion in Biotechnology 19 (4), pp. 331 - 337 (2008)

Olsen, J. V.; Butter, F.; Hubner, N.; Cox, J.; Hyman, A.; Mann, M.: SILAC based quantitative proteomics to determine specific protein-protein and protein-DNA interactions. FEBS Journal 275 (Suppl. Suppl. 1), p. 29 - 29 (2008)

Graumann, J.; Hubner, N. C.; Kim, J.B.; Ko, K.; Moser, M.; Kumar, C.; Cox, J.; Schöler, H.; Mann, M.: SILAC-labeling and proteome quantitation of mouse embryonic stem cells to a depth of 5111 proteins. Special Issue: 8th International Symposium On Mass Spectrometry In The Life Sciences, pp. 672 - 683 (2008)

Graumann, J.; Hubner, N. C.; Kim, J. B.; Ko, K.; Moser, M.; Kumar, C.; Cox, J.; Schöler, H.; Mann, M.: Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins. Molecular & Cellular Proteomics 7 (4), pp. 672 - 683 (2008)

de Godoy, L.; Cox, J.; Olsen, J.; Bonaldi, T.; Kumar, C.; Hubner, N.; Macek, B.; Mann, M.: Expression proteomics at last; the determination of Proteome wide protein abundance changes by SILAC and high resolution mass Spectrometry. Molecular & Cellular Proteomics 6 (8 (Supplement)), 1.1, p. 18 - 18 (2007)

Hubner, N. C.: Mapping the human interactome by BAC TransgeneOmics and quantitative mass spectrometry. Dissertation, Technische Universität, München (2010)

Hubner, N.: Proteomics of Embryonic Stem Cells to a Depth of 6,335 Proteins. Master, Technische Universität, München (2007)