Publications of Philipp E. Geyer

Journal Article (36)

1.
Journal Article
Shalon, D.; Culver, R. N.; Grembi, J. A.; Folz, J.; Treit, P. V.; Shi, H.; Rosenberger, F. A.; Dethlefsen, L.; Meng, X.; Yaffe, E. et al.; Aranda-Diaz, A.; Geyer, P. E.; Mueller-Reif, J. B.; Spencer, S.; Patterson, A. D.; Triadafilopoulos, G.; Holmes, S. P.; Mann, M.; Fiehn, O.; Relman, D. A.; Huang, K. C.: Profiling the human intestinal environment under physiological conditions. Nature 617 (7961), pp. 581 - 591 (2023)
2.
Journal Article
Thienel, M.; Müller-Reif, J. B.; Zhang, Z.; Ehreiser, V.; Huth, J.; Shchurovska, K.; Kilani, B.; Schweizer, L.; Geyer, P. E.; Zwiebel, M. et al.; Novotny, J.; Luesebrink, E.; Little, G.; Orban, M.; Nicolai, L.; El Nemr, S.; Titova, A.; Spannagl, M.; Kindberg, J.; Evans, A. L.; Mach, O.; Vogel, M.; Tiedt, S.; Ormanns, S.; Kessler, B.; Dueck, A.; Friebe, A.; Jorgensen, P. G.; Majzoub-Altweck, M.; Blutke, A.; Polzin, A.; Stark, K.; Kaab, S.; Maier, D.; Gibbins, J. M.; Limper, U.; Frobert, O.; Mann, M.; Massberg, S.; Petzold, T.: Immobility-associated thromboprotection is conserved across mammalian species from bear to human. Science 380 (6641), pp. 178 - 187 (2023)
3.
Journal Article
Wuyts, S.; Alves, R.; Zimmermann-Kogadeeva, M.; Nishijima, S.; Blasche, S.; Driessen, M.; Geyer, P. E.; Hercog, R.; Kartal, E.; Maier, L. et al.; Müller, J. B.; Santamarina, S. G.; Schmidt, T. S. B.; Sevin, D. C.; Telzerow, A.; Treit, P. V.; Wenzel, T.; Typas, A.; Patil, K. R.; Mann, M.; Kuhn, M.; Bork, P.: Consistency across multi-omics layers in a drug-perturbed gut microbial community. Molecular Systems Biology, e11525 (2023)
4.
Journal Article
Niu, L.; Thiele, M.; Geyer, P. E.; Rasmussen, D. N.; Webel, H. E.; Santos, A.; Gupta, R.; Meier, F.; Strauss, M. T.; Kjaergaard, M. et al.; Lindvig, K.; Jacobsen, S.; Rasmussen, S.; Hansen, T.; Krag, A.; Mann, M.: Noninvasive proteomic biomarkers for alcohol-related liver disease. Nature Medicine 28, pp. 1277 - 1287 (2022)
5.
Journal Article
Niu, L.; Geyer, P. E.; Gupta, R.; Santos, A.; Meier, F.; Doll, S.; Albrechtsen, N. J. W.; Klein, S.; Ortiz, C.; Uschner, F. E. et al.; Schierwagen, R.; Trebicka, J.; Mann, M.: Dynamic human liver proteome atlas reveals functional insights into disease pathways. Molecular Systems Biology 18 (5), e10947 (2022)
6.
Journal Article
Santos, A.; Colaco, A. R.; Nielsen, A. B.; Niu, L.; Strauss, M.; Geyer, P. E.; Coscia, F.; Albrechtsen, N. J. W.; Mundt, F.; Jensen, L. J. et al.; Mann, M.: A knowledge graph to interpret clinical proteomics data. Nature Biotechnology 40, pp. 692 - 702 (2022)
7.
Journal Article
Voronina, L.; Leonardo, C.; Mueller-Reif, J. B.; Geyer, P. E.; Huber, M.; Trubetskov, M.; Kepesidis, K. V.; Behr, J.; Mann, M.; Krausz, F. et al.; Zigman, M.: Molecular origin of blood-based infrared spectroscopic fingerprints. Angewandte Chemie International Edition 60 (31), pp. 17060 - 17069 (2021)
8.
Journal Article
Mayr, C. H.; Simon, L. M.; Leuschner, G.; Ansari, M.; Schniering, J.; Geyer, P. E.; Angelidis, I.; Strunz, M.; Singh, P.; Kneidinger, N. et al.; Reichenberger, F.; Silbernagel, E.; Boehm, S.; Adler, H.; Lindner, M.; Maurer, B.; Hilgendorff, A.; Prasse, A.; Behr, J.; Mann, M.; Eickelberg, O.; Theis, F. J.; Schiller, H. B.: Integrative analysis of cell state changes in lung fibrosis with peripheral protein biomarkers. Embo Molecular Medicine 13 (4), e12871 (2021)
9.
Journal Article
Geyer, P. E.; Mann, S. P.; Treit, P. V.; Mann, M.: Plasma Proteomes Can Be Reidentifiable and Potentially Contain Personally Sensitive and Incidental Findings. Molecular and Cellular Proteomics 20, 100035 (2021)
10.
Journal Article
Mann, S. P.; Treit, P. V.; Geyer, P. E.; Omenn, G. S.; Mann, M.: Ethical Principles, Constraints, and Opportunities in Clinical Proteomics. Molecular and Cellular Proteomics 20, 100046 (2021)
11.
Journal Article
Müller-Reif, J. B.; Hansen, F. M.; Schweizer, L.; Treit, P. V.; Geyer, P. E.; Mann, M.: A New Parallel High-Pressure Packing System Enables Rapid Multiplexed Production of Capillary Columns. Molecular and Cellular Proteomics 20, 100082 (2021)
12.
Journal Article
Pangratz-Fuehrer, S.; Genzel-Boroviczeny, O.; Bodensohn, W. E.; Eisenburger, R.; Scharpenack, J.; Geyer, P. E.; Müller-Reif, J. B.; van Hagen, N.; Muller, A. M.; Jensen, M. K. et al.; Klein, C.; Mann, M.; Nussbaum, C.: Cohort profile: the MUNICH Preterm and Term Clinical study (MUNICH-PreTCl), a neonatal birth cohort with focus on prenatal and postnatal determinants of infant and childhood morbidity. BMJ Open 11 (6), e050652 (2021)
13.
Journal Article
Sachs, S.; Niu, L.; Geyer, P.; Jall, S.; Kleinert, M.; Feuchtinger, A.; Stemmer, K.; Brielmeier, M.; Finan, B.; DiMarchi, R. D. et al.; Tschop, M. H.; Wewer Albrechtsen, N. J.; Mann, M.; Mueller, T. D.; Hofmann, S. M.: Plasma proteome profiles treatment efficacy of incretin dual agonism in diet-induced obese female and male mice. Diabetes, Obesity and Metabolism 23, pp. 195 - 207 (2021)
14.
Journal Article
Voronina, L.; Leonardo, C.; Müller-Reif, J. B.; Geyer, P. E.; Huber, M.; Trubetskov, M.; Kepesidis, K. V.; Behr, J.; Mann, M.; Krausz, F. et al.; Zigman, M.: Molecular Origin of Blood-Based Infrared Spectroscopic Fingerprints**. Angewandte Chemie International Edition 60 (31), pp. 17060 - 17069 (2021)
15.
Journal Article
Bader, J. M.; Geyer, P. E.; Müller, J. B.; Strauss, M. T.; Koch, M.; Leypoldt, F.; Koertvelyessy, P.; Bittner, D.; Schipke, C. G.; Incesoy, E. I. et al.; Peters, O.; Deigendesch, N.; Simons, M.; Jensen, M. K.; Zetterberg, H.; Mann, M.: Proteome profiling in cerebrospinal fluid reveals novel biomarkers of Alzheimer's disease. MOLECULAR SYSTEMS BIOLOGY 16 (6), e9356 (2020)
16.
Journal Article
Herholt, A.; Galinski, S.; Geyer, P. E.; Rossner, M. J.; Wehr, M. C.: Multiparametric Assays for Accelerating Early drug discovery. TRENDS IN PHARMACOLOGICAL SCIENCES 41 (5), pp. 318 - 335 (2020)
17.
Journal Article
Karayel, Ö.; Tonelli, F.; Virreira Winter, S.; Geyer, P. E.; Fan, Y.; Sammler, E. M.; Alessi, D. R.; Steger, M.; Mann, M.: Accurate MS-based Rab10 Phosphorylation Stoichiometry Determination as Readout for LRRK2 Activity in Parkinson's Disease. Molecular and Cellular Proteomics 19 (9), pp. 1546 - 1560 (2020)
18.
Journal Article
Müller, J. B.; Geyer, P. E.; Colaco, A. R.; Treit, P. V.; Strauss, M. T.; Oroshi, M.; Doll, S.; Winter, S. V.; Bader, J. M.; Koehler, N. et al.; Theis, F.; Santos, A.; Mann, M.: The proteome landscape of the kingdoms of life. NATURE 582, pp. 592 - 596 (2020)
19.
Journal Article
Geyer, P. E.; Voytik, E.; Treit, P. V.; Doll, S.; Kleinhempel, A.; Niu, L.; Müller, J. B.; Buchholtz, M.-L.; Bader, J. M.; Teupser, D. et al.; Holdt, L. M.; Mann, M.: Plasma Proteome Profiling to detect and avoid sample-related biases in biomarker studies. EMBO MOLECULAR MEDICINE 11 (11), e10427 (2019)
20.
Journal Article
Ignjatovic, V.; Geyer, P. E.; Palaniappan, K. K.; Chaaban, J. E.; Omenn, G. S.; Baker, M. S.; Deutsch, E. W.; Schwenk, J. M.: Mass Spectrometry-Based Plasma Proteomics: Considerations from Sample Collection to Achieving Translational Data. Journal of Proteome Research 18 (12), pp. 4085 - 4097 (2019)
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