Publications of Matthias Mann

Deen, D.; Butter, F.; Daniels, D. E.; Ferrer-Vicens, I.; Ferguson, D. C. J.; Holland, M. L.; Samara, V.; Sloane-Stanley, J. A.; Ayyub, H.; Mann, M. et al.; Frayne, J.; Garrick, D.; Vernimmen, D.: Identification of the transcription factor MAZ as a regulator of erythropoiesis. Blood Advances 5 (15), pp. 3002 - 3015 (2021)

Deshmukh, A. S.; Steenberg, D. E.; Hostrup, M.; Birk, J. B.; Larsen, J. K.; Santos, A.; Kjobsted, R.; Hingst, J. R.; Scheele, C. C.; Murgia, M. et al.; Kiens, B.; Richter, E. A.; Mann, M.; Wojtaszewski, J. F. P.: Deep muscle-proteomic analysis of freeze-dried human muscle biopsies reveals fiber type-specific adaptations to exercise training. Nature Communications 12 (1), 304 (2021)

Franz, A.; Coscia, F.; Shen, C.; Charaoui, L.; Mann, M.; Sander, C.: Molecular response to PARP1 inhibition in ovarian cancer cells as determined by mass spectrometry based proteomics. Journal of Ovarian Research 14 (1), 140 (2021)

Frauenstein, A.; Ebner, S.; Hansen, F. M.; Sinha, A.; Phulphagar, K.; Swatek, K.; Hornburg, D.; Mann, M.; Meissner, F.: Identification of covalent modifications regulating immune signaling complex composition and phenotype. Molecular Systems Biology 17 (7), e10125 (2021)

Geyer, P. E.; Mann, S. P.; Treit, P. V.; Mann, M.: Plasma Proteomes Can Be Reidentifiable and Potentially Contain Personally Sensitive and Incidental Findings. Molecular and Cellular Proteomics 20, 100035 (2021)

Ghanawi, H.; Hennlein, L.; Zare, A.; Bader, J. M.; Salehi, S.; Hornburg, D.; Ji, C.; Sivadasan, R.; Drepper, C.; Meissner, F. et al.; Mann, M.; Jablonka, S.; Briese, M.; Sendtner, M.: Loss of full-length hnRNP R isoform impairs DNA damage response in motoneurons by inhibiting Yb1 recruitment to chromatin. Nucleic Acids Research 49 (21), pp. 12284 - 12305 (2021)

Hansen, F. M.; Tanzer, M. C.; Brüning, F.; Bludau, I.; Stafford, C.; Schulman, B. A.; Robles, M. S.; Karayel, O.; Mann, M.: Data-independent acquisition method for ubiquitinome analysis reveals regulation of circadian biology. Nature Communications 12 (1), 254 (2021)

Hoefig, K. P.; Reim, A.; Gallus, C.; Wong, E. H.; Behrens, G.; Conrad, C.; Xu, M.; Kifinger, L.; Ito-Kureha, T.; Defourny, K. A. Y. et al.; Geerlof, A.; Mautner, J.; Hauck, S. M.; Baumjohann, D.; Feederle, R.; Mann, M.; Wierer, M.; Glasmacher, E.; Heissmeyer, V.: Defining the RBPome of primary T helper cells to elucidate higher-order Roquin-mediated mRNA regulation. Nature Communications 12 (1), 5208 (2021)

Ji, C.; Bader, J. M.; Ramanathan, P.; Hennlein, L.; Meissner, F.; Jablonka, S.; Mann, M.; Fischer, U.; Sendtner, M.; Briese, M.: Interaction of 7SK with the Smn complex modulates snRNP production. Nature Communications 12 (1), 1278 (2021)

Kaya-Copur, A.; Marchiano, F.; Hein, M. Y.; Alpern, D.; Russeil, J.; Luis, N. M.; Mann, M.; Deplancke, B.; Habermann, B. H.; Schnorrer, F.: The Hippo pathway controls myofibril assembly and muscle fiber growth by regulating sarcomeric gene expression. eLife 10, e63726 (2021)

Mann, M.; Kumar, C.; Zeng, W.-F.; Strauss, M. T.: Artificial intelligence for proteomics and biomarker discovery. Cell Systems 12 (8), pp. 759 - 770 (2021)

Mann, S. P.; Treit, P. V.; Geyer, P. E.; Omenn, G. S.; Mann, M.: Ethical Principles, Constraints, and Opportunities in Clinical Proteomics. Molecular and Cellular Proteomics 20, 100046 (2021)

Meier, F.; Koehler, N. D.; Brunner, A.-D.; Wanka, J.-M. H.; Voytik, E.; Strauss, M. T.; Theis, F. J.; Mann, M.: Deep learning the collisional cross sections of the peptide universe from a million experimental values. Nature Communications 12 (1), 1185 (2021)

Meier, F.; Park, M. A.; Mann, M.: Trapped Ion Mobility Spectrometry and Parallel Accumulation-Serial Fragmentation in Proteomics. Molecular and Cellular Proteomics 20, 100138 (2021)

Müller-Reif, J. B.; Hansen, F. M.; Schweizer, L.; Treit, P. V.; Geyer, P. E.; Mann, M.: A New Parallel High-Pressure Packing System Enables Rapid Multiplexed Production of Capillary Columns. Molecular and Cellular Proteomics 20, 100082 (2021)

Murgia, M.; Nogara, L.; Baraldo, M.; Reggiani, C.; Mann, M.; Schiaffino, S.: Protein profile of fiber types in human skeletal muscle: a single-fiber proteomics study. Skeletal Muscle 11 (1), 24 (2021)

Nagao, H.; Cai, W.; Wewer Albrechtsen, N. J.; Steger, M.; Batista, T. M.; Pan, H.; Dreyfuss, J. M.; Mann, M.; Kahn, C. R.: Distinct signaling by insulin and IGF-1 receptors and their extra- and intracellular domains. Proceedings of the National Academy of Sciences of the United States of America 118 (17), e2019474118 (2021)

Niu, L.; Sulek, K.; Vasilopoulou, C. G.; Santos, A.; Wewer Albrechtsen, N. J.; Rasmussen, S.; Meier, F.; Mann, M.: Defining NASH from a Multi-Omics Systems Biology Perspective. Journal of Clinical Medicine 10 (20), 4673 (2021)

Pangratz-Fuehrer, S.; Genzel-Boroviczeny, O.; Bodensohn, W. E.; Eisenburger, R.; Scharpenack, J.; Geyer, P. E.; Müller-Reif, J. B.; van Hagen, N.; Muller, A. M.; Jensen, M. K. et al.; Klein, C.; Mann, M.; Nussbaum, C.: Cohort profile: the MUNICH Preterm and Term Clinical study (MUNICH-PreTCl), a neonatal birth cohort with focus on prenatal and postnatal determinants of infant and childhood morbidity. BMJ Open 11 (6), e050652 (2021)

Procida, T.; Friedrich, T.; Jack, A. P. M.; Peritore, M.; Bonisch, C.; Eberl, H. C.; Daus, N.; Kletenkov, K.; Nist, A.; Stiewe, T. et al.; Borggrefe, T.; Mann, M.; Bartkuhn, M.; Hake, S. B.: JAZF1, A Novel p400/TIP60/NuA4 Complex Member, Regulates H2A.Z Acetylation at Regulatory Regions. International Journal of Molecular Sciences 22 (2), 678 (2021)