Publications of Jürgen Cox
All genres
Journal Article (138)
1.
Journal Article
23 (1), pp. 117 - 129 (2024)
Multicenter Collaborative Study to Optimize Mass Spectrometry Workflows of Clinical Specimens. Journal of Proteome Research 2.
Journal Article
41, pp. 1776 - 1786 (2023)
Global detection of human variants and isoforms by deep proteome sequencing. Nature Biotechnology 3.
Journal Article
20 (5), pp. 714 - 722 (2023)
Prioritized mass spectrometry increases the depth, sensitivity and data completeness of single-cell proteomics. Nature Methods 4.
Journal Article
20 (3), pp. 375 - 386 (2023)
Initial recommendations for performing, benchmarking and reporting single-cell proteomics experiments. Nature Methods 5.
Journal Article
13 (1), 2736 (2022)
Deubiquitinating enzymes and the proteasome regulate preferential sets of ubiquitin substrates. Nature Communications 6.
Journal Article
2 (4), 100198 (2022)
Perseus plugin "Metis'' for metabolic-pathway-centered quantitative multi-omics data analysis for static and time-series experimental designs. Cell Reports: Methods 7.
Journal Article
17 (3), e0266395 (2022)
Tracing back variations in archaeal ESCRT-based cell division to protein domain architectures. PLoS One 8.
Journal Article
40 (3), pp. 301 - 317.e12 (2022)
The proteogenomic subtypes of acute myeloid leukemia. Cancer Cell 9.
Journal Article
23 (3), bbac138 (2022)
Benchmarking differential expression, imputation and quantification methods for proteomics data. Briefings in Bioinformatics 10.
Journal Article
94 (3), pp. 1608 - 1617 (2022)
Accurate and Automated High-Coverage Identification of Chemically Cross-Linked Peptides with MaxLynx. Analytical Chemistry 11.
Journal Article
39, pp. 1563 - 1573 (2021)
MaxDIA enables library-based and library-free data-independent acquisition proteomics. Nature Biotechnology 12.
Journal Article
12 (1), 4100 (2021)
Redirected nuclear glutamate dehydrogenase supplies Tet3 with alpha-ketoglutarate in neurons. Nature Communications 13.
Journal Article
117 (8), pp. 4099 - 4108 (2020)
Role for ribosome-associated quality control in sampling proteins for MHC class I-mediated antigen presentation. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 14.
Journal Article
26 (2), pp. 277 - 293.e8 (2020)
Defining the Adult Neural Stem Cell Niche Proteome Identifies Key Regulators of Adult Neurogenesis. CELL STEM CELL 15.
Journal Article
28 (11), pp. 1259 - 1268 (2020)
Toward Increased Reliability, Transparency, and Accessibility in Cross-linking Mass Spectrometry. Structure 16.
Journal Article
19 (6), pp. 1058 - 1069 (2020)
MaxQuant Software for Ion Mobility Enhanced Shotgun Proteomics. MOLECULAR & CELLULAR PROTEOMICS 17.
Journal Article
580, pp. 235 - 238 (2020)
The dental proteome of Homo antecessor. Nature 18.
Journal Article
584 (7820), p. E19 - E19 (2020)
Author Correction: The dental proteome of Homo antecessor. Nature 19.
Journal Article
71 (1), e105 (2020)
Expanding the Perseus Software for Omics Data Analysis With Custom Plugins. Current protocols in bioinformatics 20.
Journal Article
19 (10), pp. 3945 - 3954 (2020)
Isobaric Matching between Runs and Novel PSM-Level Normalization in MaxQuant Strongly Improve Reporter Ion-Based Quantification. Journal of Proteome Research