Publications of Jürgen Cox
All genres
Journal Article (138)
81.
Journal Article
11 (11), pp. 1500 - 1509 (2012)
Expert System for Computer-assisted Annotation of MS/MS Spectra. MOLECULAR & CELLULAR PROTEOMICS 82.
Journal Article
8, 608, pp. [1] - [12] (2012)
Global analysis of genome, transcriptome and proteome reveals the response to aneuploidy in human cells. Molecular Systems Biology 83.
Journal Article
11 (6), pp. 3480 - 3486 (2012)
PhosphoSiteAnalyzer: A Bioinformatic Platform for Deciphering Phospho Proteomes Using Kinase Predictions Retrieved from NetworKIN. Journal of Proteome Research 84.
Journal Article
11 (6), pp. 3506 - 3508 (2012)
Correction to Feasibility of Large-Scale Phosphoproteomics with Higher Energy Collisional Dissociation Fragmentation (vol 9, pg 6786, 2010). JOURNAL OF PROTEOME RESEARCH 85.
Journal Article
11 (5), pp. 77 - 89 (2012)
Super-SILAC Allows Classification of Diffuse Large B-cell Lymphoma Subtypes by Their Protein Expression Profiles. MOLECULAR & CELLULAR PROTEOMICS 86.
Journal Article
72 (9), pp. 2428 - 2439 (2012)
Proteomic Portrait of Human Breast Cancer Progression Identifies Novel Prognostic Markers. Cancer Research 87.
Journal Article
Comparative Proteomic Analysis of Eleven Common Cell Lines Reveals Ubiquitous but Varying Expression of Most Proteins. Special Issue: Prospects in Space and Time, M111.014050, pp. [1] - [11] (2012)
88.
Journal Article
Analysis of High Accuracy, Quantitative Proteomics Data in the MaxQB Database. Special Issue: Prospects in Space and Time, M111.014068, pp. [1] - [10] (2012)
89.
Journal Article
Quantitative Proteomics Reveals That Hsp90 Inhibition Preferentially Targets Kinases and the DNA Damage Response. Special Issue: Prospects in Space and Time, M111.014654, pp. [1] - [12] (2011)
90.
Journal Article
Ultra High Resolution Linear Ion Trap Orbitrap Mass Spectrometer (Orbitrap Elite) Facilitates Top Down LC MS/MS and Versatile Peptide Fragmentation Modes. Special Issue: Prospects in Space and Time, O111.013698, pp. [1] - [11] (2011)
91.
Journal Article
A Framework for Intelligent Data Acquisition and Real-Time Database Searching for Shotgun Proteomics. Special Issue: Prospects in Space and Time, M111.013185, pp. [1] - [11] (2011)
92.
Journal Article
75 (1 Sp. Iss.), pp. 4 - 17 (2011)
Facing challenges in Proteomics today and in the coming decade: Report of Roundtable Discussions at the 4th EuPA Scientific Meeting, Portugal, Estoril 2010. Journal of Proteomics 93.
Journal Article
7, 548, pp. [1] - [8] (2011)
Deep proteome and transcriptome mapping of a human cancer cell line. Molecular Systems Biology 94.
Journal Article
11 (3), M111.013722, pp. [1] - [11] (2011)
System-wide Perturbation Analysis with Nearly Complete Coverage of the Yeast Proteome by Single-shot Ultra HPLC Runs on a Bench Top Orbitrap. Molecular & Cellular Proteomics (Special Issue: Prospects in Space and Time) 95.
Journal Article
10 (10), M111.013284, pp. [1] - [13] (2011)
A Proteome-wide, Quantitative Survey of In Vivo Ubiquitylation Sites Reveals Widespread Regulatory Roles. Molecular & Cellular Proteomics 96.
Journal Article
10 (9), M111.011015, pp. [1] - [11] (2011)
Mass Spectrometry-based Proteomics Using Q Exactive, a High-performance Benchtop Quadrupole Orbitrap Mass Spectrometer. Molecular & Cellular Proteomics 97.
Journal Article
22 (8), pp. 1373 - 1380 (2011)
Software Lock Mass by Two-Dimensional Minimization of Peptide Mass Errors. Journal of the American Society for Mass Spectrometry 98.
Journal Article
10 (8), M110.003699, pp. [1] - [9] (2011)
Deep and Highly Sensitive Proteome Coverage by LC-MS/MS Without Prefractionation. Molecular & Cellular Proteomics 99.
Journal Article
10 (4), pp. 1794 - 1805 (2011)
Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment. Journal of Proteome Research 100.
Journal Article
10 (4), pp. 1785 - 1793 (2011)
More than 100,000 Detectable Peptide Species Elute in Single Shotgun Proteomics Runs but the Majority is Inaccessible to Data-Dependent LC-MS/MS. Journal of Proteome Research