Publications of M. Mann

Graumann, J.; Hubner, N. C.; Kim, J. B.; Ko, K.; Moser, M.; Kumar, C.; Cox, J.; Schöler, H.; Mann, M.: Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins. Molecular & Cellular Proteomics 7 (4), pp. 672 - 683 (2008)

Schroder, B.; Wrocklage, C.; Pan, C.; Mann, M.; Hasilik, A.; Saftig, P.: Identification and characterisation of novel lysosomal membrane proteins. European Journal of Cell Biology 87 (Suppl. Suppl. 58), p. 57 - 57 (2008)

Ishihama, Y.; Schmidt, T.; Rappsilber, J.; Mann, M.; Hartl, F. U.; Kerner, M. J.; Frishman, D.: Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9, 102, pp. [1] - [17] (2008)

Krüger, M.; Kratchmarova, I.; Blagoev, B.; Tseng, Y. H.; Kahn, C. R.; Mann, M.: Dissection of the insulin signaling pathway via quantitative phosphoproteomics. Proceedings of the National Academy of Sciences of the United States of America 105 (7), pp. 2451 - 2456 (2008)

Mathivanan, S.; Ahmed, M.; Ahn, N. G.; Alexandre, H.; Amanchy, R.; Andrews, P. C.; Bader, J. S.; Balgley, B. M.; Bantscheff, M.; Bennett, K. L. et al.; Bjorling, E.; Blagoev, B.; Bose, R.; Brahmachari, S. K.; Burlingame, A. S.; Bustelo, X. R.; Cagney, G.; Cantin, G. T.; Cardasis, H. L.; Celis, J. E.; Chaerkady, R.; Chu, F. X.; Cole, P. A.; Costello, C. E.; Cotter, R. J.; Crockett, D.; DeLany, J. P.; De Marzo, A. M.; DeSouza, L. V.; Deutsch, E. W.; Dransfield, E.; Drewes, G.; Droit, A.; Dunn, M. J.; Elenitoba-Johnson, K.; Ewing, R. M.; Van Eyk, J.; Faca, V.; Falkner, J.; Fang, X. M.; Fenselau, C.; Figeys, D.; Gagne, P.; Gelfi, C.; Gevaert, K.; Gimble, J. M.; Gnad, F.; Goel, R.; Gromov, P.; Hanash, S. M.; Hancock, W. S.; Harsha, H. C.; Hart, G.; Hays, F.; He, F. C.; Hebbar, P.; Helsens, K.; Hermeking, H.; Hide, W.; Hjerno, K.; Hochstrasser, D. F.; Hofmann, O.; Horn, D. M.; Hruban, R. H.; Ibarrola, N.; James, P.; Jensen, O. N.; Jensen, P. H.; Jung, P.; Kandasamy, K.; Kheterpal, I.; Kikuno, R. F.; Korf, U.; Körner, R.; Kuster, B.; Kwon, M. S.; Lee, H. J.; Lee, Y. J.; Lefevre, M.; Lehvaslaiho, M.; Lescuyer, P.; Levander, F.; Lim, M. S.; Lobke, C.; Loo, J. A.; Mann, M.; Martens, L.; Martinez-Heredia, J.; McComb, M.; McRedmond, J.; Mehrle, A.; Menon, R.; Miller, C. A.; Mischak, H.; Mohan, S. S.; Mohmood, R.; Molina, H.; Moran, M. F.; Morgan, J. D.; Moritz, R.: Human Proteinpedia enables sharing of human protein data. Nature Biotechnology 26 (2), pp. 164 - 167 (2008)

Bandeira, N.; Olsen, J. V.; Mann, M.; Pevzner, P. A.: Multi-spectra peptide sequencing and its applications to multistage mass spectrometry. Bioinformatics 24 (13), pp. i416 - i423 (2008)

Grgurevic, L.; Macek, B.; Durdevic, D.; Erjavec, I.; Pandzic, M.; Mann, M.; Vukicevic, S.: Novel biomarkers in the plasma of patients with a bone fracture. Calcified Tissue International 82 (Suppl. Suppl. 1), pp. S122 - S123 (2008)

Grgurevic, L.; Macek, B.; Mann, M.; Vukicevic, S.: Circulating BMP-1 isoforms: Novel diagnostic and therapeutic challenges for bone fracture repair. Calcified Tissue International 82 (Suppl. Suppl. 1), p. S123 - S123 (2008)

Zougman, A.; Pilch, B.; Podtelejnikov, A.; Kiehntopf, M.; Schnabel, C.; Kumar, C.; Mann, M.: Integrated analysis of the cerebrospinal fluid peptidome and proteome. Journal of Proteome Research 7 (1), pp. 386 - 399 (2008)

Lu, A.; Waanders, L. F.; Almeida, R.; Li, G. Q.; Allen, M.; Cox, J.; Olsen, J. V.; Bonaldi, T.; Mann, M.: Nanoelectrospray peptide mapping revisited: Composite survey spectra allow high dynamic range protein characterization without LCMS on an orbitrap mass spectrometer. International Journal of Mass Spectrometry 268 (2-3), pp. 158 - 167 (2007)

Schröder, B.; Wrocklage, C.; Pan, C.; Jäger, R.; Kösters, B.; Schäfer, H.; Elsässer, H. P.; Mann, M.; Hasilik, A.: Integral and associated lysosomal membrane proteins. Traffic 8 (12), pp. 1676 - 1686 (2007)

Wisniewski, J. R.; Zougman, A.; Mann, M.: N{varepsilon}-Formylation of lysine is a widespread post-translational modification of nuclear proteins occurring at residues involved in regulation of chromatin function. Nucleic Acids Research 36 [2008] (2), pp. 570 - 577 (2007)

Mann, K.; Mann, M.: The chicken egg yolk plasma and granule proteomes. PROTEOMICS 8 [2008] (1), pp. 178 - 191 (2007)

Waanders, L. F.; Hanke, S.; Mann, M.: Top-down quantitation and characterization of SILAC-labeled proteins. Journal of the American Society for Mass Spectrometry 18 (11), pp. 2058 - 2064 (2007)

Kirmizis, A.; Santos-Rosa, H.; Penkett, C. J.; Singer, M. A.; Vermeulen, M.; Mann, M.; Bahler, J.; Green, R. D.; Kouzarides, T.: Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation. Nature 449 (7164), pp. 928 - U17 (2007)

Macek, B.; Gnad, F.; Soufi, B.; Kumar, C.; Olsen, J. V.; Mijakovi, I.; Mann, M.: Phosphoproteome Analysis of E. coli Reveals Evolutionary Conservation of Bacterial Ser/Thr/Tyr Phosphorylation. Molecular & Cellular Proteomics 7 [2008] (2), pp. 299 - 307 (2007)

Matic, I.; van Hagen, M.; Schimmel, J.; Macek, B.; Ogg, S. C.; Tatham, M. H.; Hay, R. T.; Lamond, A. I.; Mann, M.; Vertegaal, A. C. O.: In vivo identification of human small ubiquitin-like modifier polymerization sites by high accuracy mass spectrometry and an in vitro to in vivo strategy. Molecular & Cellular Proteomics 7 [2008] (1), pp. 132 - 144 (2007)

Miller, M. L.; Hanke, S.; Hinsby, A. M.; Friis, C.; Brunak, S.; Mann, M.; Blom, N.: Motif decomposition of the phosphotyrosine proteome reveals a new N-terminal binding motif for SHIP2. Molecular & Cellular Proteomics 7 [2008] (1), pp. 181 - 192 (2007)

Vermeulen, M.; Mulder, K. W.; Denissov, S.; Pijnappel, W. W. M. P.; van Schaik, F. M. A.; Varier, R. A.; Baltissen, M. P. A.; Stunnenberg, H. G.; Mann, M.; Timmers, H. T. M.: Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4. Cell 131 (1), pp. 58 - 69 (2007)

Olsen, J. V.; Macek, B.; Lange, O.; Makarov, A.; Horning, S.; Mann, M.: Higher-energy C-trap dissociation for peptide modification analysis. Nature Methods 4 (9), pp. 709 - 712 (2007)