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Rasch, M.; Saxton, W. O.; Baumeister, W.: The Regular Surface Layer of Acetogenium kivui: Some Structural, Developmental and Evolutionary Aspects. FEMS Microbiol. Lett. 24 (2-3), pp. 285 - 290 (1984)

Saxton, W. O.; Baumeister, W.; Hahn, M.: Three-dimensional reconstruction of imperfect two-dimensional crystals. Ultramicroscopy 13 (1-2), pp. 57 - 70 (1984)

Urbas, W.: Informationsvermittlung in der Max-Planck-Gesellschaft. Nachrichten für Dokumentation 35 (3), pp. 124 - 129 (1984)

Rachel, R.; Engel, A.; Baumeister, W.: Proteolysis of the major cell envelope protein of Deinococcus radiodurans remains morphologically latent. FEMS Microbiology Letters 17, pp. 115 - 119 (1983)

Engel, A.; Baumeister, W.; Saxton, W. O.: Mass mapping of a protein complex with the scanning transmission electron microscope. Proceedings of the National Academy of Sciences of the United States of America 79 (13), pp. 4050 - 4054 (1982)

Steven, A. C.; Baumeister, W.; Johnson, L. N.; Perham, R. N.: Molecular Biology of Assemblies and Machines. Garland Science, New York (2016), 852 pp.

Messerschmidt, A. (Ed.): Handbook of Metalloproteins. Vol. 4 & 5. Wiley, New York (2011), 944 pp.

Budisa, N.: Engineering the Genetic Code - Expanding the Amino Acid Repertoire for the Design of Novel Proteins. Wiley-VCH, Weinheim, New York, Brisbane, Singapore, Toronto (2005), 312 pp.

Goodman, M.; Felix, A.; Moroder, L.; Toniolo, C. (Eds.): Synthesis of Peptides and Peptidomimetics. Thieme, Stuttgart (2003), 785 pp.

Goodman, M.; Felix, A.; Moroder, L.; Toniolo, C. (Eds.): Synthesis of Peptides and Peptidomimetics. Thieme, Stuttgart (2003), 847 pp.

Goodman, M.; Felix, A.; Moroder, L.; Toniolo, C. (Eds.): Synthesis of Peptides and Peptidomimetics. Thieme, Stuttgart (2003), 395 pp.

Goodman, M.; Felix, A.; Moroder, L.; Toniolo, C. (Eds.): Synthesis of Peptides and Peptidomimetics. Thieme, Stuttgart (2003), 497 pp.

Goodman, M.; Felix, A.; Moroder, L.; Toniolo, C. (Eds.): Synthesis of Peptides and Peptidomimetics. Thieme, Stuttgart (2002), 901 pp.

Zwickl, P.; Baumeister, W.: The Proteasome-Ubiquitin Protein Degradation Pathway. Springer-Verlag, Berlin Heidelberg (2002), 213 pp.

Colton, R.J.; Engel, A.; Frommer, J.E.; Gaub, H.E.; Gewirth, A.A.; Guckenberger, R.; Heckl, W.M.; Parkinson, B.; Rabe, J.: Procedures in scanning probe microscopy. John Wiley & Sons, Chichester, New York (1998)

Siegenthaler, H.; Guckenberger, R.; Hartmann, T.; Knapp, H.F.; Meyer, E.; Pohl, D.W.; Wiesendanger, R.: Recent Developments. Berlin, Springer (1995), 303-342 pp.

Amrein, M.; Gross, H.; Guckenberger, R.: STM of proteins and membranes. Academic press Inc., San Diego (1993), 127-176 pp.

Filipović, F.; Retzer, T.; Duderstadt, K.: Isolation and Analysis of Rare Enzymatic Events with Multiplex Flow Magnetic Tweezers. In: Molecular Motors: Methods in Molecular Biology, Vol. 2881, pp. 213 - 238 (Eds. Lavelle, C.; Le Gall, A.). Springer US, New York, NY (2025)

Huber, R.: Epilogue: ‘Did You Know?’ (that you are likely to be awarded the Nobel Prize). In: Curious Future Insight, pp. 273 - 274 (Ed. Betz, U. A.K.). Springer International Publishing, Cham (2024)

Plitzko, J. M.; Bollschweiler, D.: Fundamentals of Instrumentation and Electron Optics for Cryo-Electron Tomography. In: Cryo-Electron Tomography: Structural Biology in situ, Vol. 11, pp. 1 - 52 (Eds. Förster, F.; Briegel, A.). Springer International Publishing, Cham (2024)