Publications of Friedhelm Pfeiffer

Laass, S.; Monzon, V. A.; Kliemt, J.; Hammelmann, M.; Pfeiffer, F.; Foerstner, K. U.; Soppa, J.: Characterization of the transcriptome of Haloferax volcanii, grown under four different conditions, with mixed RNA-Seq. PLoS One 14 (4), e0215986 (2019)

Pfeiffer, F.; Marchfelder, A.; Habermann, B.; Dyall-Smith, M.: The Genome Sequence of the Halobacterium salinarum Type Strain Is Closely Related to That of Laboratory Strains NRC-1 and R1. Microbiology Resource Announcements 8 (28), e00429-19 (2019)

Wolters, M.; Borst, A.; Pfeiffer, F.; Soppa, J.: Bioinformatic and genetic characterization of three genes localized adjacent to the major replication origin of Haloferax volcanii. FEMS MICROBIOLOGY LETTERS 366 (21), fnz238 (2019)

Prytuliak, R.; Pfeiffer, F.; Habermann, B. H.: SLALOM, a flexible method for the identification and statistical analysis of overlapping continuous sequence elements in sequence- and time-series data. BMC Bioinformatics 19, 24 (2018)

Pfeiffer, F.; Zamora-Lagos, M.-A.; Blettinger, M.; Yeroslaviz, A.; Dahl, A.; Gruber, S.; Habermann, B. H.: The complete and fully assembled genome sequence of Aeromonas salmonicida subsp. pectinolytica and its comparative analysis with other Aeromonas species: investigation of the mobilome in environmental and pathogenic strains. BMC Genomics 19, 20 (2018)

Dyall-Smith, M.; Pfeifer, F.; Witte, A.; Oesterhelt, D.; Pfeiffer, F.: Complete Genome Sequence of the Model Halovirus PhiH1 (PhiH1). Genes 9 (10), 493 (2018)

Dyall-Smith, M.; Pfeiffer, F.: The PL6-Family Plasmids of Haloquadratum Are Virus-Related. Frontiers in Microbiology 9, 1070 (2018)

Pohlschroder, M.; Pfeiffer, F.; Schulze, S.; Halim, M. F. A.: Archaeal cell surface biogenesis. FEMS Microbiology Reviews 42 (5), pp. 694 - 717 (2018)

Zamora-Lagos, M.-A.; Eckstein, S.; Langer, A.; Gazanis, A.; Pfeiffer, F.; Habermann, B.; Heermann, R.: Phenotypic and genomic comparison of Photorhabdus luminescens subsp laumondii TT01 and a widely used rifampicin-resistant Photorhabdus luminescens laboratory strain. BMC Genomics 19, 854 (2018)

Pfeiffer, F.; Bagyan, I.; Alfaro-Espinoza, G.; Zamora-Lagos, M.-A.; Habermann, B.; Marin-Sanguino, A.; Oesterhelt, D.; Kunte, H. J.: Revision and reannotation of the Halomonas elongata DSM 2581(T) genome. MicrobiologyOpen, e465 (2017)

Kindzierski, V.; Raschke, S.; Knabe, N.; Siedler, F.; Scheffer, B.; Pflueger-Grau, K.; Pfeiffer, F.; Oesterhelt, D.; Marin-Sanguino, A.; Kunte, H.-J.: Osmoregulation in the Halophilic Bacterium Halomonas elongata: A Case Study for Integrative Systems Biology. PLoS One 12 (1), e0168818 (2017)

Hwang, S.; Cordova, B.; Abdo, M.; Pfeiffer, F.; Maupin-Furlow, J. A.: ThiN as a Versatile Domain of Transcriptional Repressors and Catalytic Enzymes of Thiamine Biosynthesis. Journal of Bacteriology 199 (7), e00810-16 (2017)

Babski, J.; Haas, K. A.; Naether-Schindler, D.; Pfeiffer, F.; Foerstner, K. U.; Hammelmann, M.; Hilker, R.; Becker, A.; Sharma, C. M.; Marchfelder, A. et al.; Soppa, J.: Genome-wide identification of transcriptional start sites in the haloarchaeon Haloferax volcanii based on differential RNA-Seq (dRNA-Seq). BMC Genomics 17, 629 (2016)

Jaakkola, S. T.; Pfeiffer, F.; Ravantti, J. J.; Guo, Q.; Liu, Y.; Chen, X.; Ma, H.; Yang, C.; Oksanen, H. M.; Bamford, D. H.: The complete genome of a viable archaeum isolated from 123-million-year-old rock salt. ENVIRONMENTAL MICROBIOLOGY 18 (2), pp. 565 - 579 (2016)

Talaue, C. O.; del Rosario, R.; Pfeiffer, F.; Mendoza, E. R.; Oesterhelt, D.: Model Construction and Analysis of Respiration in Halobacterium salinarum. PLOS ONE 11 (3), e0151839 (2016)

Zenke, R.; von Gronau, S.; Bolhuis, H.; Gruska, M.; Pfeiffer, F.; Oesterhelt, D.: Fluorescence microscopy visualization of halomucin, a secreted 927 kDa protein surrounding Haloquadratum walsbyi cells. FRONTIERS IN MICROBIOLOGY 6, 249 (2015)

Hwang, S.; Cordova, B.; Chavarria, N.; Elbanna, D.; McHugh, S.; Rojas, J.; Pfeiffer, F.; Maupin-Furlow, J. A.: Conserved active site cysteine residue of archaeal THI4 homolog is essential for thiamine biosynthesis in Haloferax volcanii. BMC MICROBIOLOGY 14, 260 (2014)

Kramer, P.; Gäbel, K.; Pfeiffer, F.; Soppa, J.: Haloferax volcanii, a Prokaryotic Species that Does Not Use the Shine Dalgarno Mechanism for Translation Initiation at 5 '-UTRs. PLOS ONE 9 (4), e94979 (2014)

Abdul Halim, M. F.; Pfeiffer, F.; Zou, J.; Frisch, A.; Haft, D.; Wu, S.; Tolic, N.; Brewer, H.; Payne, S. H.; Pasa-Tolic, L. et al.; Pohlschroder, M.: Haloferax volcanii archaeosortase is required for motility, mating, and C-terminal processing of the S-layer glycoprotein. MOLECULAR MICROBIOLOGY 88 (6), pp. 1164 - 1175 (2013)

Maier, L.-K.; Stoll, B.; Brendel, J.; Fischer, S.; Pfeiffer, F.; Dyall-Smith, M.; Marchfelder, A.: The ring of confidence: a haloarchaeal CRISPR/Cas system. BIOCHEMICAL SOCIETY TRANSACTIONS 41 (Part 1), pp. 374 - 378 (2013)