Publications of Matthias Mann

Journal Article (610)

21.
Journal Article
Herchenroether, A.; Gossen, S.; Friedrich, T.; Reim, A.; Daus, N.; Diegmueller, F.; Leers, J.; Sani, H. M.; Gerstner, S.; Schwarz, L. et al.; Stellmacher, I.; Szymkowiak, L. V.; Nist, A.; Stiewe, T.; Borggrefe, T.; Mann, M.; Mackay, J. P.; Bartkuhn, M.; Borchers, A.; Lan, J.; Hake, S. B.: The H2A.Z and NuRD associated protein HMG20A controls early head and heart developmental transcription programs. Nature Communications 14 (1), 472 (2023)
22.
Journal Article
Skowronek, P.; Krohs, F.; Lubeck, M.; Wallmann, G.; Itang, E. C.M.; Koval, P.; Wahle, M.; Thielert, M.; Meier, F.; Willems, S. et al.; Raether, O.; Mann, M.: Synchro-PASEF Allows Precursor-Specific Fragment Ion Extraction and Interference Removal in Data-Independent Acquisition. Molecular & Cellular Proteomics 22 (2), 100489 (2023)
23.
Journal Article
Frank, D.; Patnana, P. K.; Vorwerk, J.; Mao, L.; Gopal, L. M.; Jung, N.; Hennig, T.; Ruhnke, L.; Frenz, J. M.; Kuppusamy, M. et al.; Autry, R.; Wei, L.; Sun, K.; Ahmed, H. M. M.; Kuenstner, A.; Busch, H.; Mueller, H.; Hutter, S.; Hoermann, G.; Liu, L.; Xie, X.; Al-Matary, Y.; Nimmagadda, S. C.; Cano, F. C.; Heuser, M.; Thol, F.; Goehring, G.; Steinemann, D.; Thomale, J.; Leitner, T.; Fischer, A.; Rad, R.; Roellig, C.; Altmann, H.; Kunadt, D.; Berdel, W. E.; Hueve, J.; Neumann, F.; Klingauf, J.; Calderon, V.; Opalka, B.; Duehrsen, U.; Rosenbauer, F.; Dugas, M.; Varghese, J.; Reinhardt, H. C.; von Bubnoff, N.; Moroy, T.; Lenz, G.; Batcha, A. M. N.; Giorgi, M.; Selvam, M.; Wang, E.; Mcweeney, S. K.; Tyner, J. W.; Stoelzel, F.; Mann, M.; Jayavelu, A. K.; Khandanpour, C.: Germ line variant GFI1-36N affects DNA repair and sensitizes AML cells to DNA damage and repair therapy. Blood 142 (25), pp. 2175 - 2191 (2023)
24.
Journal Article
Kessler, T.; Sager, H. B.; Mann, M.: Role of the extracellular matrix in cell-cell communication: a new therapeutic target? European Heart Journal (2023)
25.
Journal Article
Lobentanzer, S.; Aloy, P.; Baumbach, J.; Bohar, B.; Carey, V. J.; Charoentong, P.; Danhauser, K.; Dogan, T.; Dreo, J.; Dunham, I. et al.; Farr, E.; Fernandez-Torras, A.; Gyori, B. M.; Hartung, M.; Hoyt, C. T.; Klein, C.; Korcsmaros, T.; Maier, A.; Mann, M.; Ochoa, D.; Pareja-Lorente, E.; Popp, F.; Preusse, M.; Probul, N.; Schwikowski, B.; Sen, B.; Strauss, M. T.; Turei, D.; Ulusoy, E.; Waltemath, D.; Wodke, J. A. H.; Saez-Rodriguez, J.: Democratizing knowledge representation with BioCypher. Nature Biotechnology (2023)
26.
Journal Article
Salehi, S.; Zare, A.; Prezza, G.; Bader, J.; Schneider, C.; Fischer, U.; Meissner, F.; Mann, M.; Briese, M.; Sendtner, M.: Cytosolic Ptbp2 modulates axon growth in motoneurons through axonal localization and translation of Hnrnpr. Nature Communications 14 (1), 4158 (2023)
27.
Journal Article
Wuyts, S.; Alves, R.; Zimmermann-Kogadeeva, M.; Nishijima, S.; Blasche, S.; Driessen, M.; Geyer, P. E.; Hercog, R.; Kartal, E.; Maier, L. et al.; Müller, J. B.; Santamarina, S. G.; Schmidt, T. S. B.; Sevin, D. C.; Telzerow, A.; Treit, P. V.; Wenzel, T.; Typas, A.; Patil, K. R.; Mann, M.; Kuhn, M.; Bork, P.: Consistency across multi-omics layers in a drug-perturbed gut microbial community. Molecular Systems Biology, e11525 (2023)
28.
Journal Article
Bader, J. M.; Deigendesch, N.; Misch, M.; Mann, M.; Koch, A.; Meissner, F.: Proteomics separates adult-type diffuse high- grade gliomas in metabolic subgroups independent of 1p/19q codeletion and across IDH mutational status. Cell Reports Medicine 4 (1), 100877 (2022)
29.
Journal Article
Bhatia, H. S.; Brunner, A.-D.; Oeztuerk, F.; Kapoor, S.; Rong, Z.; Mai, H.; Thielert, M.; Ali, M.; Al-Maskari, R.; Paetzold, J. C. et al.; Kofler, F.; Todorov, M. I.; Molbay, M.; Kolabas, Z. I.; Negwer, M.; Hoeher, L.; Steinke, H.; Dima, A.; Gupta, B.; Kaltenecker, D.; Caliskan, O. S.; Brandt, D.; Krahmer, N.; Mueller, S.; Lichtenthaler, S. F.; Hellal, F.; Bechmann, I.; Menze, B.; Theis, F.; Mann, M.; Ertuerk, A.: Spatial proteomics in three-dimensional intact specimens. Cell 185 (26), pp. 5040 - 5058 (2022)
30.
Journal Article
Murgia, M.; Brocca, L.; Monti, E.; Franchi, M. V. V.; Zwiebel, M.; Steigerwald, S.; Giacomello, E.; Sartori, R.; Zampieri, S.; Capovilla, G. et al.; Gasparini, M.; Biolo, G.; Sandri, M.; Mann, M.; Narici, M. V. V.: Plasma proteome profiling of healthy subjects undergoing bed rest reveals unloading-dependent changes linked to muscle atrophy. Journal of Cachexia, Sarcopenia and Muscle (2022)
31.
Journal Article
Sherpa, D.; Mueller, J.; Karayel, Ö.; Xu, P.; Yao, Y.; Chrustowicz, J.; Gottemukkala, K. V.; Baumann, C.; Gross, A.; Czarnecki, O. et al.; Zhang, W.; Gu, J.; Nilvebrant, J.; Sidhu, S. S.; Murray, P. J.; Mann, M.; Weiss, M. J.; Schulman, B. A.; Alpi, A. F.: Modular UBE2H-CTLH E2-E3 complexes regulate erythroid maturation. eLife 11, e77937 (2022)
32.
Journal Article
Reußwig, K.-U.; Bittmann, J.; Peritore, M.; Courtes, M.; Pardo, B.; Wierer, M.; Mann, M.; Pfander, B.: Unscheduled DNA replication in G1 causes genome instability and damage signatures indicative of replication collisions. Nature Communications 13 (1), 7014 (2022)
33.
Journal Article
Wirth, A.-K.; Wange, L.; Vosberg, S.; Henrich, K.-O.; Rausch, C.; Oezdemir, E.; Zeller, C. M.; Richter, D.; Feuchtinger, T.; Kaller, M. et al.; Hermeking, H.; Greif, P. A.; Senft, D.; Jurinovic, V.; Bahrami, E.; Jayavelu, A. K.; Westermann, F.; Mann, M.; Enard, W.; Herold, T.; Jeremias, I.: In vivo PDX CRISPR/Cas9 screens reveal mutual therapeutic targets to overcome heterogeneous acquired chemo-resistance. Leukemia (2022)
34.
Journal Article
Yahya, G.; Menges, P.; Amponsah, P. S.; Ngandiri, D. A.; Schulz, D.; Wallek, A. U.; Kulak, N. A.; Mann, M.; Cramer, P.; Savage, V. et al.; Raeschle, M.; Storchova, Z.: Sublinear scaling of the cellular proteome with ploidy. Nature Communications 13 (1), 6182 (2022)
35.
Journal Article
Diamanti, K.; Cavalli, M.; Pereira, M. J.; Pan, G.; Castillejo-Lopez, C.; Kumar, C.; Mundt, F.; Komorowski, J.; Deshmukh, A. S.; Mann, M. et al.; Korsgren, O.; Eriksson, J. W.; Wadelius, C.: Organ-specific metabolic pathways distinguish prediabetes, type 2 diabetes, and normal tissues. Cell Reports Medicine 3 (10), 100763 (2022)
36.
Journal Article
Skowronek, P.; Thielert, M.; Voytik, E.; Tanzer, M. C.; Hansen, F. M.; Willems, S.; Karayel, O.; Brunner, A.-D.; Meier, F.; Mann, M.: Rapid and In-Depth Coverage of the (Phospho-) Proteome With Deep Libraries and Optimal Window Design for dia-PASEF. Molecular and Cellular Proteomics 21 (9), 100279 (2022)
37.
Journal Article
Sirinian, C.; Papanastasiou, A. D.; Karayel, O.; Degn, S. E.; Peroukidis, S.; Chaniotis, D.; Nonni, A.; Repanti, M.; Kriegsmann, M.; Makatsoris, T. et al.; Koutras, A.; Mann, M.; Kalofonos, H. P.: Analysis of RANK-c interaction partners identifies TRAF3 as a critical regulator of breast cancer aggressiveness. Neoplasia 33, 100836 (2022)
38.
Journal Article
Mehta, S.; Buyanbat, A.; Kai, Y.; Karayel, O.; Goldman, S. R.; Seruggia, D.; Zhang, K.; Fujiwara, Y.; Donovan, K. A.; Zhu, Q. et al.; Yang, H.; Nabet, B.; Gray, N. S.; Mann, M.; Fischer, E. S.; Adelman, K.; Orkin, S. H.: Temporal resolution of gene derepression and proteome changes upon PROTAC-mediated degra-dation of BCL11A protein in erythroid cells. Cell Chemical Biology 29 (8), pp. 1273 - 1287 (2022)
39.
Journal Article
Mund, A.; Brunner, A.-D.; Mann, M.: Unbiased spatial proteomics with single-cell resolution in tissues. Molecular Cell 82 (12), pp. 2335 - 2349 (2022)
40.
Journal Article
Niu, L.; Thiele, M.; Geyer, P. E.; Rasmussen, D. N.; Webel, H. E.; Santos, A.; Gupta, R.; Meier, F.; Strauss, M. T.; Kjaergaard, M. et al.; Lindvig, K.; Jacobsen, S.; Rasmussen, S.; Hansen, T.; Krag, A.; Mann, M.: Noninvasive proteomic biomarkers for alcohol-related liver disease. Nature Medicine 28, pp. 1277 - 1287 (2022)
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