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Journal Article (18)

1. 1.
   MPG.PuRe

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   Wierer, M.; Prestel, M.; Schiller, H. B.; Yan, G.; Schaab, C.; Azghandi, S.; Werner, J.; Kessler, T.; Malik, R.; Murgia, M. et al.; Aherrahrou, Z.; Schunkert, H.; Dichgans, M.; Mann, M.: Compartment-resolved Proteomic Analysis of Mouse Aorta during Atherosclerotic Plaque Formation Reveals Osteoclast-specific Protein Expression. Molecular and Cellular Proteomics 17 (2), pp. 321 - 334 (2018)
2. 2.
   MPG.PuRe

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   Roolf, C.; Dybowski, N.; Sekora, A.; Mueller, S.; Knuebel, G.; Tebbe, A.; Escobar, H. M.; Godl, K.; Junghanss, C.; Schaab, C.: Phosphoproteome Analysis Reveals Differential Mode of Action of Sorafenib in Wildtype and Mutated FLT3 Acute Myeloid Leukemia (AML) Cells. Molecular and Cellular Proteomics 16 (7), pp. 1365 - 1376 (2017)
3. 3.
   MPG.PuRe

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   Grundner-Culemann, K.; Dybowski, J. N.; Klammer, M.; Tebbe, A.; Schaab, C.; Daub, H.: Comparative proteome analysis across non-small cell lung cancer cell lines. Journal of Proteomics 130, pp. 1 - 10 (2016)
4. 4.
   MPG.PuRe

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   Klammer, M.; Dybowski, J. N.; Hoffmann, D.; Schaab, C.: Pareto Optimization Identifies Diverse Set of Phosphorylation Signatures Predicting Response to Treatment with Dasatinib. PLOS ONE 10 (6) (2015)
5. 5.
   MPG.PuRe

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   Schiller, H. B.; Fernandez, I. E.; Burgstaller, G.; Schaab, C.; Scheltema, R. A.; Schwarzmayr, T.; Strom, T. M.; Eickelberg, O.; Mann, M.: Time- and compartment-resolved proteome profiling of the extracellular niche in lung injury and repair. MOLECULAR SYSTEMS BIOLOGY 11 (7) (2015)
6. 6.
   MPG.PuRe

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   Journal Article

   Tebbe, A.; Klammer, M.; Sighart, S.; Schaab, C.; Daub, H.: Systematic evaluation of label-free and super-SILAC quantification for proteome expression analysis. RAPID COMMUNICATIONS IN MASS SPECTROMETRY 29 (9), pp. 795 - 801 (2015)
7. 7.
   MPG.PuRe

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   Schaab, C.; Oppermann, F. S.; Klammer, M.; Pfeifer, H.; Tebbe, A.; Oellerich, T.; Krauter, J.; Levis, M.; Perl, A. E.; Daub, H. et al.; Steffen, B.; Godl, K.; Serve, H.: Global phosphoproteome analysis of human bone marrow reveals predictive phosphorylation markers for the treatment of acute myeloid leukemia with quizartinib. LEUKEMIA 28 (3), pp. 716 - 719 (2014)
8. 8.
   MPG.PuRe

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   Klammer, M.; Dybowski, J. N.; Hoffmann, D.; Schaab, C.: Identification of Significant Features by the Global Mean Rank Test. PLOS ONE 9 (8) (2014)
9. 9.
   MPG.PuRe

   DOI
   Journal Article

   Ryu, S. Y.; Payne, S. H.; Schaab, C.; Xiao, W.: Beyond the proteome: Mass Spectrometry Special Interest Group (MS-SIG) at ISMB/ECCB 2013. BIOINFORMATICS 30 (14), pp. 2089 - 2090 (2014)
10. 10.
    MPG.PuRe

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    Sharma, K.; D'Souza, R. C. J.; Tyanova, S.; Schaab, C.; Wisniewski, J. R.; Cox, J.; Mann, M.: Ultradeep Human Phosphoproteome Reveals a Distinct Regulatory Nature of Tyr and Ser/Thr-Based Signaling. CELL REPORTS 8 (5), pp. 1583 - 1594 (2014)
11. 11.
    MPG.PuRe

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    Guendisch, S.; Grundner-Culemann, K.; Wolff, C.; Schott, C.; Reischauer, B.; Machatti, M.; Groelz, D.; Schaab, C.; Tebbe, A.; Becker, K.-F.: Delayed Times to Tissue Fixation Result in Unpredictable Global Phosphoproteome Changes. JOURNAL OF PROTEOME RESEARCH 12 (10), pp. 4424 - 4434 (2013)
12. 12.
    MPG.PuRe

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    Journal Article

    Oppermann, F. S.; Klammer, M.; Bobe, C.; Cox, J.; Schaab, C.; Tebbe, A.; Daub, H.: Comparison of SILAC and mTRAQ Quantification for Phosphoproteomics on a Quadrupole Orbitrap Mass Spectrometer. JOURNAL OF PROTEOME RESEARCH 12 (9), pp. 4089 - 4100 (2013)
13. 13.
    MPG.PuRe

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    Stoehr, G.; Schaab, C.; Graumann, J.; Mann, M.: A SILAC-based Approach Identifies Substrates of Caspase-dependent Cleavage upon TRAIL-induced Apoptosis. MOLECULAR & CELLULAR PROTEOMICS 12 (5), pp. 1436 - 1450 (2013)
14. 14.
    MPG.PuRe

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    Mäusbacher, N.; Schreiber, T. B.; Machatti, M.; Schaab, C.; Daub, H.: Proteome-wide analysis of temporal phosphorylation dynamics in lysophosphatidic acid-induced signaling. PROTEOMICS 12 (23-24), pp. 3485 - 3498 (2012)
15. 15.
    MPG.PuRe

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    Klammer, M.; Kaminski, M.; Zedler, A.; Oppermann, F.; Blencke, S.; Marx, S.; Mueller, S.; Tebbe, A.; Godl, K.; Schaab, C.: Phosphosignature Predicts Dasatinib Response in Non-small Cell Lung Cancer. MOLECULAR & CELLULAR PROTEOMICS 11 (9), pp. 651 - 668 (2012)
16. 16.
    MPG.PuRe

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    Geiger, T.; Wehner, A.; Schaab, C.; Cox, J.; Mann, M.: Comparative Proteomic Analysis of Eleven Common Cell Lines Reveals Ubiquitous but Varying Expression of Most Proteins. Special Issue: Prospects in Space and Time (2012)
17. 17.
    MPG.PuRe

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    Schaab, C.; Geiger, T.; Stoehr, G.; Cox, J.; Mann, M.: Analysis of High Accuracy, Quantitative Proteomics Data in the MaxQB Database. Special Issue: Prospects in Space and Time (2012)
18. 18.
    MPG.PuRe

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    Klammer, M.; Godl, K.; Tebbe, A.; Schaab, C.: Identifying differentially regulated subnetworks from phosphoproteomic data. BMC Bioinformatics 11 (2010)

Meeting Abstract (1)

1. 19.
   MPG.PuRe
   Meeting Abstract

   Schaab, C.; Oppermann, F.; Pfeifer, H.; Klammer, M.; Tebbe, A.; Oellerich, T.; Krauter, J.; Levis, M. J.; Perl, A. E.; Daub, H. et al.; Steffen, B.; Godl, K.; Serve, H.: Global Phosphoproteome Analysis of AML Bone Marrow Reveals Predictive Markers for the Treatment with AC220. In BLOOD, 120 (21), 786. 54th Annual Meeting and Exposition of the American-Society-of-Hematology (ASH), Atlanta, GA, December 08, 2012 - December 11, 2012. AMER SOC HEMATOLOGY, 2021 L ST NW, SUITE 900, WASHINGTON, DC 20036 USA (2012)