Publikationen von Eri Sakata

Zeitschriftenartikel (16)

1.
Zeitschriftenartikel
Chen, X.; Sailer, C.; Kammer, K. M.; Fursch, J.; Eisele, M. R.; Sakata, E.; Pellarin, R.; Stengel, F.: Mono- and Intralink Filter (Mi-Filter) To Reduce False Identifications in Cross-Linking Mass Spectrometry Data. Analytical Chemistry 94, S. 17751 - 17756 (2022)
2.
Zeitschriftenartikel
Hung, K. Y. S.; Klumpe, S.; Eisele, M. R.; Elsasser, S.; Tian, G.; Sun, S.; Moroco, J. A.; Cheng, T. C.; Joshi, T.; Seibel, T. et al.; Van Dalen, D.; Feng, X.-H.; Lu, Y.; Ovaa, H.; Engen, J. R.; Lee, B.-H.; Rudack, T.; Sakata, E.; Finley, D.: Allosteric control of Ubp6 and the proteasome via a bidirectional switch. Nature Communications 13 (1), 838 (2022)
3.
Zeitschriftenartikel
Sakata, E.; Eisele, M. R.; Baumeister, W.: Molecular and cellular dynamics of the 26S proteasome. Biochimica et Biophysica Acta-Proteins and Proteomics 1869 (3), 140583 (2021)
4.
Zeitschriftenartikel
Eisele, M. R.; Reed, R. G.; Rudack, T.; Schweitzer, A.; Beck, F.; Nagy, I.; Pfeifer, G.; Plitzko, J. M.; Baumeister, W.; Tomko Jr., R. J. et al.; Sakata, E.: Expanded Coverage of the 26S Proteasome Conformational Landscape Reveals Mechanisms of Peptidase Gating. Cell Reports 24 (5), S. 1301 - 1315.e5 (2018)
5.
Zeitschriftenartikel
Wehmer, M.; Rudack, T.; Beck, F.; Aufderheide, A.; Pfeifer, G.; Plitzko, J. M.; Förster, F.; Schulten, K.; Baumeister, W.; Sakata, E.: Structural insights into the functional cycle of the ATPase module of the 26S proteasome. Proceedings of the National Academy of Sciences of the United States of America 114 (6), S. 1305 - 1310 (2017)
6.
Zeitschriftenartikel
Wang, X.; Cimermancic, P.; Yu, C.; Schweitzer, A.; Chopra, N.; Engel, J. L.; Greenberg, C.; Huszagh, A. S.; Beck, F.; Sakata, E. et al.; Yang, Y.; Novitsky, E. J.; Leitner, A.; Nanni, P.; Kahraman, A.; Guo, X.; Dixon, J. E.; Rychnovsky, S. D.; Aebersold, R.; Baumeister, W.; Sali, A.; Huang, L.: Molecular Details Underlying Dynamic Structures and Regulation of the Human 26S Proteasome. Molecular and Cellular Proteomics 16 (5), S. 840 - 854 (2017)
7.
Zeitschriftenartikel
Wehmer, M.; Sakata, E.: Recent advances in the structural biology of the 26S proteasome. International Journal of Biochemistry and Cell Biology 79, S. 437 - 442 (2016)
8.
Zeitschriftenartikel
Schweitzer, A.; Aufderheide, A.; Rudack, T.; Beck, F.; Pfeifer, G.; Plitzko, J. M.; Sakata, E.; Schulten, K.; Förster, F.; Baumeister, W.: Structure of the human 26S proteasome at a resolution of 3.9 angstrom. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 113 (28), S. 7816 - 7821 (2016)
9.
Zeitschriftenartikel
Aufderheide, A.; Beck, F.; Stengel, F.; Hartwig, M.; Schweitzer, A.; Pfeifer, G.; Goldberg, A. L.; Sakata, E.; Baumeister, W.; Förster, F.: Structural characterization of the interaction of Ubp6 with the 26S proteasome. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 112 (28), S. 8626 - 8631 (2015)
10.
Zeitschriftenartikel
Pack, C.-G.; Yukii, H.; Toh-e, A.; Kudo, T.; Tsuchiya, H.; Kaiho, A.; Sakata, E.; Murata, S.; Yokosawa, H.; Sako, Y. et al.; Baumeister, W.; Tanaka, K.; Saeki, Y.: Quantitative live-cell imaging reveals spatio-temporal dynamics and cytoplasmic assembly of the 26S proteasome. NATURE COMMUNICATIONS 5, 3396 (2014)
11.
Zeitschriftenartikel
Fernandez-Busnadiego, R.; Asano, S.; Oprisoreanu, A.-M.; Sakata, E.; Doengi, M.; Kochovski, Z.; Zuemer, M.; Stein, V.; Schoch, S.; Baumeister, W. et al.; Lucic, V.: Cryo-electron tomography reveals a critical role of RIM1 alpha in synaptic vesicle tethering. JOURNAL OF CELL BIOLOGY 201 (5), S. 725 - 740 (2013)
12.
Zeitschriftenartikel
Bohn, S.; Sakata, E.; Beck, F.; Pathare, G. R.; Schnitger, J.; Nagy, I.; Baumeister, W.; Förster, F.: Localization of the regulatory particle subunit Semi in the 26S proteasome. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 435 (2), S. 250 - 254 (2013)
13.
Zeitschriftenartikel
Beck, F.; Unverdorben, P.; Bohn, S.; Schweitzer, A.; Pfeifer, G.; Sakata, E.; Nickell, S.; Plitzko, J. M.; Villa, E.; Baumeister, W. et al.; Förster, F.: Near-atomic resolution structural model of the yeast 26S proteasome. Proceedings of the National Academy of Sciences of the United States of America 109 (37), S. 14870 - 14875 (2012)
14.
Zeitschriftenartikel
Sakata, E.; Bohn, S.; Mihalache, O.; Kiss, P.; Beck, F.; Nagy, I.; Nickell, S.; Tanaka, K.; Saeki, Y.; Förster, F. et al.; Baumeister, W.: Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy. Proceedings of the National Academy of Sciences of the United States of America 109 (5), S. 1479 - 1484 (2012)
15.
Zeitschriftenartikel
Sakata, E.; Stengel, F.; Fukunaga, K.; Zhou, M.; Saeki, Y.; Förster, F.; Baumeister, W.; Tanaka, K.; Robinson, C. V.: The Catalytic Activity of Ubp6 Enhances Maturation of the Proteasomal Regulatory Particle. Molecular Cell 42 (5), S. 637 - 649 (2011)
16.
Zeitschriftenartikel
Bohn, S.; Beck, F.; Sakata, E.; Walzthoeni, T.; Beck, M.; Aebersold, R.; Förster, F.; Baumeister, W.; Nickell, S.: Structure of the 26S proteasome from Schizosaccharomyces pombe at subnanometer resolution. Proceedings of the National Academy of Sciences of the United States of America 107 (49), S. 20992 - 20997 (2010)

Buchkapitel (1)

17.
Buchkapitel
Förster, F.; Sakata, E.: 26S Proteasome: Structure and Function. In: Encyclopedia of Biological Chemistry, 2nd Ed. Aufl., S. 595 - 600 (Hg. Lennarz, W. J.; Lane, M. D.). Elsevier, Amsterdam (2013)
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