Publications

Journal Article (805)

1.
Journal Article
Greulich, F.; Wierer, M.; Mechtidou, A.; Gonzalez-Garcia, O.; Uhlenhaut, N. H.: The glucocorticoid receptor recruits the COMPASS complex to regulate inflammatory transcription at macrophage enhancers. Cell Reports 34 (6), 108742 (2021)
2.
Journal Article
Bartoschek, M. D.; Ugur, E.; Nguyen, T.-A.; Rodschinka, G.; Wierer, M.; Lang, K.; Bultmann, S.: Identification of permissive amber suppression sites for efficient non-canonical amino acid incorporation in mammalian cells. Nucleic Acids Research (London) 49 (11), e62 (2021)
3.
Journal Article
Bludau, I.; Frank, M.; Doerig, C.; Cai, Y.; Heusel, M.; Rosenberger, G.; Picotti, P.; Collins, B. C.; Rost, H.; Aebersold, R.: Systematic detection of functional proteoform groups from bottom-up proteomic datasets. Nature Communications 12 (1), 3810 (2021)
4.
Journal Article
Bryk, A. H.; Zettl, K.; Wisniewski, J. R.; Undas, A.: Glycation and acetylation sites on fibrinogen in plasma fibrin clot of patients with type 2 diabetes: Effects of low-dose acetylsalicylic acid. Thrombosis Research 198, pp. 93 - 98 (2021)
5.
Journal Article
Daled, S.; Willems, S.; Van Puyvelde, B.; Corveleyn, L.; Verhelst, S.; De Clerck, L.; Deforce, D.; Dhaenens, M.: Histone Sample Preparation for Bottom-Up Mass Spectrometry: A Roadmap to Informed Decisions. Proteomes 9 (2), 17 (2021)
6.
Journal Article
Deshmukh, A. S.; Steenberg, D. E.; Hostrup, M.; Birk, J. B.; Larsen, J. K.; Santos, A.; Kjobsted, R.; Hingst, J. R.; Scheele, C. C.; Murgia, M. et al.; Kiens, B.; Richter, E. A.; Mann, M.; Wojtaszewski, J. F. P.: Deep muscle-proteomic analysis of freeze-dried human muscle biopsies reveals fiber type-specific adaptations to exercise training. Nature Communications 12 (1), 304 (2021)
7.
Journal Article
Dus-Szachniewicz, K.; Rymkiewicz, G.; Agrawal, A. K.; Kolodziej, P.; Wisniewski, J. R.: Large-Scale Proteomic Analysis of Follicular Lymphoma Reveals Extensive Remodeling of Cell Adhesion Pathway and Identifies Hub Proteins Related to the Lymphomagenesis. Cancers 13 (4), 630 (2021)
8.
Journal Article
Fossati, A.; Li, C.; Uliana, F.; Wendt, F.; Frommelt, F.; Sykacek, P.; Heusel, M.; Hallal, M.; Bludau, I.; Capraz, T. et al.; Xue, P.; Song, J.; Wollscheid, B.; Purcell, A. W.; Gstaiger, M.; Aebersold, R.: PCprophet: a framework for protein complex prediction and differential analysis using proteomic data. Nature Methods 18 (5), pp. 520 - + (2021)
9.
Journal Article
Geyer, P. E.; Mann, S. P.; Treit, P. V.; Mann, M.: Plasma Proteomes Can Be Reidentifiable and Potentially Contain Personally Sensitive and Incidental Findings. Molecular and Cellular Proteomics 20, 100035 (2021)
10.
Journal Article
Gostomska-Pampuch, K.; Drulis-Fajdasz, D.; Gizak, A.; Wisniewski, J. R.; Rakus, D.: Absolute Proteome Analysis of Hippocampus, Cortex and Cerebellum in Aged and Young Mice Reveals Changes in Energy Metabolism. International Journal of Molecular Sciences 22 (12), 6188 (2021)
11.
Journal Article
Hansen, F. M.; Tanzer, M. C.; Brüning, F.; Bludau, I.; Stafford, C.; Schulman, B. A.; Robles, M. S.; Karayel, O.; Mann, M.: Data-independent acquisition method for ubiquitinome analysis reveals regulation of circadian biology. Nature Communications 12 (1), 254 (2021)
12.
Journal Article
Ji, C.; Bader, J.; Ramanathan, P.; Hennlein, L.; Meissner, F.; Jablonka, S.; Mann, M.; Fischer, U.; Sendtner, M.; Briese, M.: Interaction of 7SK with the Smn complex modulates snRNP production. Nature Communications 12 (1), 1278 (2021)
13.
Journal Article
Koenig, K. C.; Lahm, H.; Dressen, M.; Doppler, S. A.; Eichhorn, S.; Beck, N.; Kraehschuetz, K.; Doll, S.; Holdenrieder, S.; Kastrati, A. et al.; Lange, R.; Krane, M.: Aggrecan: a new biomarker for acute type A aortic dissection. Scientific Reports 11 (1), 10371 (2021)
14.
Journal Article
Mann, S. P.; Treit, P. V.; Geyer, P. E.; Omenn, G. S.; Mann, M.: Ethical Principles, Constraints, and Opportunities in Clinical Proteomics. Molecular and Cellular Proteomics 20, 100046 (2021)
15.
Journal Article
Meier, F.; Koehler, N. D.; Brunner, A.-D.; Wanka, J.-M. H.; Voytik, E.; Strauss, M. T.; Theis, F. J.; Mann, M.: Deep learning the collisional cross sections of the peptide universe from a million experimental values. Nature Communications 12 (1), 1185 (2021)
16.
Journal Article
Monti, E.; Reggiani, C.; Franchi, M. V.; Toniolo, L.; Sandri, M.; Armani, A.; Zampieri, S.; Giacomello, E.; Sarto, F.; Sirago, G. et al.; Murgia, M.; Nogara, L.; Marcucci, L.; Ciciliot, S.; Simunic, B.; Pisot, R.; Narici, M. V.: Neuromuscular junction instability and altered intracellular calcium handling as early determinants of force loss during unloading in humans. The Journal of Physiology - London (2021)
17.
Journal Article
Nagao, H.; Cai, W.; Wewer Albrechtsen, N. J.; Steger, M.; Batista, T. M.; Pan, H.; Dreyfuss, J. M.; Mann, M.; Kahn, C. R.: Distinct signaling by insulin and IGF-1 receptors and their extra- and intracellular domains. Proceedings of the National Academy of Sciences of the United States of America 118 (17), e2019474118 (2021)
18.
Journal Article
Qin, W.; Stengl, A.; Ugur, E.; Leidescher, S.; Ryan, J.; Cardoso, M. C.; Leonhardt, H.: HP1 beta carries an acidic linker domain and requires H3K9me3 for phase separation. The Nucleus 12 (1), pp. 44 - 57 (2021)
19.
Journal Article
Rosales, M.; Rodriguez-Ulloa, A.; Besada, V.; Ramon, A. C.; Perez, G. V.; Ramos, Y.; Guirola, O.; Gonzalez, L. J.; Zettl, K.; Wisniewski, J. R. et al.; Perera, Y.; Perea, S. E.: Phosphoproteomic Landscape of AML Cells Treated with the ATP-Competitive CK2 Inhibitor CX-4945. Cells 10 (2), 338 (2021)
20.
Journal Article
Sachs, S.; Niu, L.; Geyer, P.; Jall, S.; Kleinert, M.; Feuchtinger, A.; Stemmer, K.; Brielmeier, M.; Finan, B.; DiMarchi, R. D. et al.; Tschop, M. H.; Wewer Albrechtsen, N. J.; Mann, M.; Mueller, T. D.; Hofmann, S. M.: Plasma proteome profiles treatment efficacy of incretin dual agonism in diet-induced obese female and male mice. Diabetes, Obesity and Metabolism 23, pp. 195 - 207 (2021)
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