Ferredoxin-dependent oxidative decarboxylases of Halobacterium salinarum
Two key enzymatic steps in central metabolism are the conversion of pyruvate to acetyl-CoA and of alpha-ketoglutarate to succinyl-CoA. These enzymatic reactions result in oxidative decarboxylation of the substrate. In Halobacterium salinarum and many archaea these are catalyzed by ferredoxin-dependent protein complexes while in Escherichia coli and most bacteria and eukaryotes these are catalyzed by lipoamide-dependent enzyme complexes.
I. Pyruvate dehydrogenase (ferredoxin)
Transcription unit porAB, which encodes for the pyruvate dehydrogenase (graphic generated by HaloLex).
Physiological role:
Reaction catalyzed:
Protein complex:
Subunits:
Genes:
Coenzymes and redox partners:
ferredoxin fdx OE4217R
coenzyme A
thiamine pyrophosphate
Experimental data:
The protein was purified and its catalytic properties were determined.
The molecular weight of the protein complex and its subunits as well as the amino acid composition was determined.
Protein sequencing of the N-terminus and of internal peptides was achieved.
The presence of the coenzyme thiamine pyrophosphate and the absence of the coenzyme lipoamide was verified.
References:
- W. Plaga, F. Lottspeich, D. Oesterhelt:
Improved Purification, Crystallization and Primary Structure of Pyruvate:Ferredoxin Oxidoreductase from Halobacterium halobium.
Eur. J. Biochem. 205, 391-397 (1992)
- L. Kerscher, D. Oesterhelt:
Purification and Properties of Two 2-Oxoacid:Ferredoxin Oxidoreductases from Halobacterium halobium.
J. Biochem. 116, 587-594 (1981)
- L. Kerscher, D. Oesterhelt:
The Catalytic Mechanism of 2-Oxoacid:Ferredoxin Oxidoreductases from Halobacterium halobium: One-Electron Transfer at two Distinct Steps of the Catalytic Cycle.
Eur. J. Biochem. 116, 595-600 (1981)
II. Alpha-ketoglutarate dehydrogenase (ferredoxin)
Transcription unit korAB, which encodes for the alpha-ketoglutarate dehydrogenase (graphic generated by HaloLex).
Physiological role:
- alpha-detoglutarate dehydrogenase is one step of the citric acid cycle.
Reaction catalyzed:
- alpha-ketoglutarate + HSCoA + fdx(ox) --> succinyl-CoA + CO2 + fdx(red)
Subunits:
Genes:
- the genes korA-korB form a transcription unit.
Coenzymes and redox partners:
- ferredoxin fdx OE4217R
- coenzyme A
- thiamine pyrophosphate
Experimental data:
- The protein was purified and its catalytic properties were determined.
- The molecular weight of the protein complex and its subunits as well as the amino acid composition was determined.
- The presence of the coenzyme thiamine pyrophosphate and the absence of the coenzyme lipoamide was verified.
- The genes for the subunits were cloned and sequenced.
References
- L. Kerscher, D. Oesterhelt:
Purification and Properties of Two 2-Oxoacid:Ferredoxin Oxidoreductases from Halobacterium halobium.
J. Biochem. 116, 587-594 (1981)
- L. Kerscher, D. Oesterhelt:
The Catalytic Mechanism of 2-Oxoacid:Ferredoxin Oxidoreductases from Halobacterium halobium: One-Electron Transfer at two Distinct Steps of the Catalytic Cycle.
Eur. J. Biochem. 116, 595-600 (1981)