Tomography Toolbox    

tom_stage_calib_manual

calibrates the stage movement relative to CCD coordinates

Syntax

calibrates the stage movement relative to CCD coordinates

Input:
Search :state (structure), to set microscope in a certain mode
COMS :state (structure), to set microscope in a certain mode
itarations :structrure including the interface to the microcoscope (ActiveX Server)
   
to check the organisation of the structures see tom_make_acquisition_structure and tom_make_all_coms

 

Description

tom_stage_calib_manual calibrates the stage by moving the
stage in x-direction and measuring the shift in the CCD coordinate system.
The same is done for y-direction. By using the shifts measured on the CCD
a rotation matrix, describing the transformation of two coordinate systems,
is calculated and stored in the calibration structure.
Note: In tom_tilt_series the stage calibration is stored dependent on
the actual tiltangle to provide an higher accuracy of the movement.

Examples

[Calibration]=tom_stage_calib_manual(Search,COMS,1)

See Also

tom_tilt_series

    tom_shiftoffset tom_tilt_series