Tomography Toolbox    

tom_acquire

acquires a tilt-series

Syntax

tom_acquire(Tiltseries,Search,Tracking,Focus,Acquisition,Slit,COMS)

Input:  
Tiltseries :state (strcture), including the information to setup a tilt-series
Search :state (structure), to set microscope in serach mode (not used ... maybe useful for bad stages)
Tracking :state (structure), to set microscope in Tracking mode
Focus :state (structure), to set microscope in Focus mode
Acquisition :state (structure), to set microscope in Acquisition mode
Slit :state (structure), to set microscope in "Slit mode" ... used for centering the Slit
COMS :structrure including the interface to the microscope (ActiveX Server)
   
to check the organisation of the structures see tom_make_acquisition_structure and tom_make_all_coms

 

Description

tom_acquire acquires a tiltseries by tilting the stage and setting the microscope in Tracking,Focus,Acquisition and Slit mode.
Tracking mode is used to center the object.
Focus mode is used to do the autofocus.
Slit mode is used to center Slit of the energy filter.
Acquisition mode is used to acquire the projection image.
(autoeucentricheight, autofocus and Silt must be set before)

Examples

tom_acquire(handles.Tiltseries,handles.Search,handles.Tracking,handles.Focus,handles.Acquisition,handles.Slit,handles.COMS);

See Also

tom_make_acquisition_structure, tom_make_all_Coms, tom_acquire_tracking,
tom_acquire_focus, tom_center_slit, tom_acquire_acquisition

 

    Roadmap tom_acquire_acquisition